Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RPS3AP52-201ENST00000435639 297 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AL136097.1-201ENST00000456945 913 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 CEACAMP4-201ENST00000457676 421 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 RNU7-167P-201ENST00000459160 62 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 RNU7-170P-201ENST00000459303 61 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 MTND4P17-201ENST00000470444 350 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AC010285.1-201ENST00000470580 392 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AC012181.1-201ENST00000479895 423 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AL049873.1-201ENST00000480540 376 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 RNU2-69P-201ENST00000516061 100 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-256P-201ENST00000516747 97 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 ZNF192P1-203ENST00000565888 810 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 MIR3672-201ENST00000584290 82 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AC023043.2-201ENST00000589678 1026 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AC005034.5-201ENST00000604219 466 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AL158032.1-201ENST00000605401 106 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AC022893.3-201ENST00000607665 437 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 U2.17-201ENST00000611454 95 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AC006386.2-201ENST00000624491 75 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 AC012005.1-201ENST00000624575 75 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 MIR7153-201ENST00000637758 57 ntBASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBE3BQ7Z3V4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AL353746.1-201ENST00000566293 6881 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AC066616.2-201ENST00000559334 1481 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AF127577.6-201ENST00000623352 2191 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 Y_RNA.135-201ENST00000363439 95 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 RNU1-140P-201ENST00000365040 165 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 RNA5SP219-201ENST00000390940 113 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AL139397.2-201ENST00000404529 772 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 RPL5P18-201ENST00000406671 891 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 RNA5SP31-201ENST00000411144 127 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AL513331.1-201ENST00000411908 397 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 RPS12P24-201ENST00000412619 387 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 RPLP0P7-201ENST00000416050 667 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AL160275.3-201ENST00000423876 471 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AL591212.2-201ENST00000433923 257 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 VDAC1P3-201ENST00000434069 851 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AC087588.1-201ENST00000462203 316 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 SNRPGP3-201ENST00000469405 227 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AC108860.1-201ENST00000484521 383 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AC104136.1-201ENST00000512969 394 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 RNU1-143P-201ENST00000516296 146 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 Y_RNA.682-201ENST00000516457 100 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-566P-201ENST00000516790 107 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 U1.23-201ENST00000610293 146 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AC012531.5-201ENST00000611375 151 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 DUSP12P1-201ENST00000612874 516 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 AC034102.8-201ENST00000615146 484 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 RNU1-68P-201ENST00000615382 146 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 U1.39-201ENST00000621562 146 ntBASIC3.86□□□□□ -1.79
UBE3BQ7Z3V4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 DEFB108F-201ENST00000344638 222 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 RNU1-75P-201ENST00000347264 129 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 SNORA63-201ENST00000363450 132 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 SNORA71.1-201ENST00000364523 117 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 RN7SKP158-201ENST00000410453 326 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 RNA5SP111-201ENST00000411386 101 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 MTCO2P12-201ENST00000427426 682 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 Y_RNA.635-201ENST00000459041 101 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 MLLT10P2-201ENST00000506434 249 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 SNORA14.1-201ENST00000516113 141 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-1069P-201ENST00000516612 133 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 RNA5SP454-201ENST00000517231 127 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms