Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RNU5E-1-201ENST00000362477 120 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 RNA5SP37-201ENST00000365420 130 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 RNU6-946P-201ENST00000383878 107 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 RNU6-1083P-201ENST00000384022 107 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 RNU6-658P-201ENST00000384606 106 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HMGCS1Q01581 AL023284.1-201ENST00000403956 276 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 AL355497.1-201ENST00000406262 551 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 RN7SKP192-201ENST00000411291 327 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 NDUFS5P4-201ENST00000412983 318 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 AC006366.1-201ENST00000422002 759 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 AL353729.1-201ENST00000425044 720 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 MED14P1-201ENST00000430517 648 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 AL139415.2-201ENST00000431968 163 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HMGCS1Q01581 RPL32P28-201ENST00000443577 397 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 TAF9P1-201ENST00000445421 515 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 AL353705.4-201ENST00000449661 238 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 MTATP6P7-201ENST00000453315 681 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 TAF9P2-201ENST00000454958 515 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 RNU2-10P-201ENST00000516375 211 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 RNU6-703P-201ENST00000516946 107 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 MIR5571-201ENST00000577998 113 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 AC009977.1-201ENST00000586015 570 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 AC002984.1-201ENST00000591692 448 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 AC073544.2-201ENST00000601155 540 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 BNIP3P9-201ENST00000603714 553 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 AL359999.1-201ENST00000604513 294 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 AL121917.1-203ENST00000605534 577 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HMGCS1Q01581 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 AC013412.1-201ENST00000610687 192 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 AL365204.3-201ENST00000612448 685 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 AL603755.1-201ENST00000619504 163 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 MTND5P42-201ENST00000637720 498 ntBASIC1.99□□□□□ -2.09
HMGCS1Q01581 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
HMGCS1Q01581 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
HMGCS1Q01581 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
HMGCS1Q01581 MTND4P4-201ENST00000439033 1366 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HMGCS1Q01581 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HMGCS1Q01581 SNORD56.2-201ENST00000363242 71 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 RNU6-960P-201ENST00000364056 120 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 SNORA4.3-201ENST00000365564 137 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 RNU6-39P-201ENST00000384344 107 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 RNU6-817P-201ENST00000391083 104 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 RPL26P27-201ENST00000414397 437 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 AC096649.2-201ENST00000416186 393 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.98□□□□□ -2.09
HMGCS1Q01581 DPH3P2-201ENST00000422618 250 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 CYCSP46-201ENST00000423569 204 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 AC027124.2-201ENST00000428249 105 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 AC098831.1-201ENST00000440661 216 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.98□□□□□ -2.09
HMGCS1Q01581 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HMGCS1Q01581 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.98□□□□□ -2.09
HMGCS1Q01581 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.98□□□□□ -2.09
HMGCS1Q01581 AC093899.1-201ENST00000457984 376 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 FABP5P5-201ENST00000515537 406 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 RNU1-40P-201ENST00000516816 164 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 RNU1-97P-201ENST00000516872 164 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.98□□□□□ -2.09
HMGCS1Q01581 RPL21P5-201ENST00000554662 472 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 MTND3P12-201ENST00000559068 328 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 AC021739.1-201ENST00000559631 174 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 RPS3AP23-202ENST00000574601 686 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 MIR3199-1-201ENST00000582434 88 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.98□□□□□ -2.09
HMGCS1Q01581 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.98□□□□□ -2.09
HMGCS1Q01581 AC009314.1-201ENST00000603871 304 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 AC010889.1-201ENST00000566193 2666 ntBASIC1.98□□□□□ -2.09
HMGCS1Q01581 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.98□□□□□ -2.09
HMGCS1Q01581 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HMGCS1Q01581 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HMGCS1Q01581 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.97□□□□□ -2.09
HMGCS1Q01581 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.97□□□□□ -2.09
HMGCS1Q01581 RNU4-21P-201ENST00000362802 126 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.97□□□□□ -2.09
HMGCS1Q01581 MT-TH-201ENST00000387441 69 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 MRPL42P2-201ENST00000403169 426 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 Y_RNA.598-201ENST00000410480 95 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AL139156.1-201ENST00000412785 841 ntBASIC1.97□□□□□ -2.09
HMGCS1Q01581 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.97□□□□□ -2.09
HMGCS1Q01581 AC114491.1-201ENST00000416095 246 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms