Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ERVFC1P60507 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.26□□□□□ -1.73
ERVFC1P60507 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ERVFC1P60507 RNU6-545P-201ENST00000362681 104 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 snoU2_19.2-201ENST00000363024 80 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 RNU6-525P-201ENST00000363685 104 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 Y_RNA.200-201ENST00000364018 102 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 SNORA5A-201ENST00000384111 134 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 SNORA9-201ENST00000384215 133 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 Y_RNA.458-201ENST00000384240 102 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.26□□□□□ -1.73
ERVFC1P60507 MRPL35P1-201ENST00000404272 572 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ERVFC1P60507 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.26□□□□□ -1.73
ERVFC1P60507 RPL30P10-201ENST00000488148 337 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 RPL29P14-201ENST00000495837 428 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.26□□□□□ -1.73
ERVFC1P60507 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.26□□□□□ -1.73
ERVFC1P60507 Y_RNA.703-201ENST00000516846 111 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.26□□□□□ -1.73
ERVFC1P60507 AC073410.2-201ENST00000603240 332 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 AL713866.2-201ENST00000603579 219 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 AP000787.2-201ENST00000604432 568 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.26□□□□□ -1.73
ERVFC1P60507 AC019176.2-201ENST00000611579 315 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 AC084757.4-201ENST00000616350 526 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 AC091953.5-201ENST00000622919 233 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.26□□□□□ -1.73
ERVFC1P60507 Z75746.1-201ENST00000440243 2080 ntBASIC4.26□□□□□ -1.73
ERVFC1P60507 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.26□□□□□ -1.73
ERVFC1P60507 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ERVFC1P60507 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ERVFC1P60507 NOL8P1-201ENST00000508336 3529 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
ERVFC1P60507 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.25□□□□□ -1.73
ERVFC1P60507 SNORD35B-201ENST00000363660 87 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 MIR215-201ENST00000384858 110 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 AC063979.1-201ENST00000415539 377 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 AL096701.2-201ENST00000416920 238 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 RPS6P12-201ENST00000432491 726 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 AC092573.2-201ENST00000434546 243 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.25□□□□□ -1.73
ERVFC1P60507 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ERVFC1P60507 RPL23AP65-201ENST00000475608 468 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 HMGN1P11-201ENST00000508668 303 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 RNU7-143P-201ENST00000516781 65 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 Y_RNA.713-201ENST00000517013 96 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 SNORA31.22-201ENST00000517204 135 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 AC022868.1-201ENST00000517767 391 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 AC091144.1-201ENST00000519573 138 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.25□□□□□ -1.73
ERVFC1P60507 YPEL5P3-201ENST00000547227 352 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.25□□□□□ -1.73
ERVFC1P60507 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.25□□□□□ -1.73
ERVFC1P60507 AC015813.4-201ENST00000610469 179 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 AC034102.8-201ENST00000615146 484 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 AL138721.1-201ENST00000616756 179 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 AL450472.1-202ENST00000637286 180 ntBASIC4.25□□□□□ -1.73
ERVFC1P60507 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.25□□□□□ -1.73
ERVFC1P60507 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ERVFC1P60507 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ERVFC1P60507 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ERVFC1P60507 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.24□□□□□ -1.73
ERVFC1P60507 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
ERVFC1P60507 AC011266.1-201ENST00000624119 3569 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 MIR448-201ENST00000362131 111 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 Y_RNA.65-201ENST00000362846 100 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 Y_RNA.291-201ENST00000364886 113 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 RNU6-187P-201ENST00000384139 106 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 RNU6-708P-201ENST00000384217 107 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 SNORA3.3-201ENST00000408712 125 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 RNA5SP239-201ENST00000410218 129 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.24□□□□□ -1.73
ERVFC1P60507 RPL7AP73-201ENST00000413490 353 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.24□□□□□ -1.73
ERVFC1P60507 MTND3P9-201ENST00000429526 346 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 MTCO3P29-201ENST00000432119 779 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 AL159987.2-201ENST00000432754 307 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 snoU13.3-201ENST00000459441 104 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 PPIAP15-201ENST00000479662 484 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 RPS15AP34-201ENST00000487776 387 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.24□□□□□ -1.73
ERVFC1P60507 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.24□□□□□ -1.73
ERVFC1P60507 AMZ2P1-203ENST00000565833 850 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 AC087499.8-201ENST00000578406 226 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.24□□□□□ -1.73
ERVFC1P60507 MIR3133-201ENST00000583157 78 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 MIR432-201ENST00000606207 94 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 AL391261.4-201ENST00000616012 481 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.24□□□□□ -1.73
ERVFC1P60507 AC132825.6-201ENST00000638861 357 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
ERVFC1P60507 MTND5P9-201ENST00000503854 1755 ntBASIC4.24□□□□□ -1.73
ERVFC1P60507 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
ERVFC1P60507 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ERVFC1P60507 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
ERVFC1P60507 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ERVFC1P60507 RPL9P7-201ENST00000330965 580 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms