Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RN7SKP32-201ENST00000410167 303 ntBASIC3.51□□□□□ -1.85
COPAP53621 RN7SKP111-201ENST00000410349 271 ntBASIC3.51□□□□□ -1.85
COPAP53621 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.51□□□□□ -1.85
COPAP53621 AL645937.1-202ENST00000421799 937 ntBASIC3.51□□□□□ -1.85
COPAP53621 AL669831.1-202ENST00000428504 417 ntBASIC3.51□□□□□ -1.85
COPAP53621 MTND3P23-201ENST00000431980 347 ntBASIC3.51□□□□□ -1.85
COPAP53621 AL353705.1-201ENST00000433468 480 ntBASIC3.51□□□□□ -1.85
COPAP53621 IFNA20P-201ENST00000436840 528 ntBASIC3.51□□□□□ -1.85
COPAP53621 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.51□□□□□ -1.85
COPAP53621 GTF2IP13-201ENST00000438487 386 ntBASIC3.51□□□□□ -1.85
COPAP53621 CYCSP32-201ENST00000440548 321 ntBASIC3.51□□□□□ -1.85
COPAP53621 AC092798.1-201ENST00000458542 409 ntBASIC3.51□□□□□ -1.85
COPAP53621 AP002884.2-201ENST00000471647 395 ntBASIC3.51□□□□□ -1.85
COPAP53621 RN7SL442P-201ENST00000473804 320 ntBASIC3.51□□□□□ -1.85
COPAP53621 AC083904.1-201ENST00000487828 231 ntBASIC3.51□□□□□ -1.85
COPAP53621 HIGD1AP13-201ENST00000509878 289 ntBASIC3.51□□□□□ -1.85
COPAP53621 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.51□□□□□ -1.85
COPAP53621 RNU2-69P-201ENST00000516061 100 ntBASIC3.51□□□□□ -1.85
COPAP53621 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.51□□□□□ -1.85
COPAP53621 RN7SKP256-201ENST00000517201 314 ntBASIC3.51□□□□□ -1.85
COPAP53621 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.51□□□□□ -1.85
COPAP53621 AP000763.2-201ENST00000540641 163 ntBASIC3.51□□□□□ -1.85
COPAP53621 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.51□□□□□ -1.85
COPAP53621 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.51□□□□□ -1.85
COPAP53621 OR11H5P-201ENST00000554039 926 ntBASIC3.51□□□□□ -1.85
COPAP53621 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.51□□□□□ -1.85
COPAP53621 HMGB1P14-201ENST00000557424 591 ntBASIC3.51□□□□□ -1.85
COPAP53621 AC012119.1-201ENST00000603184 222 ntBASIC3.51□□□□□ -1.85
COPAP53621 HSPE1P7-201ENST00000604681 321 ntBASIC3.51□□□□□ -1.85
COPAP53621 YPEL5P2-201ENST00000605553 359 ntBASIC3.51□□□□□ -1.85
COPAP53621 Z82243.1-201ENST00000609432 473 ntBASIC3.51□□□□□ -1.85
COPAP53621 DUSP12P1-201ENST00000612874 516 ntBASIC3.51□□□□□ -1.85
COPAP53621 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COPAP53621 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COPAP53621 AC032011.1-201ENST00000611703 1549 ntBASIC3.5□□□□□ -1.85
COPAP53621 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COPAP53621 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
COPAP53621 Y_RNA.263-201ENST00000364659 114 ntBASIC3.5□□□□□ -1.85
COPAP53621 Y_RNA.399-201ENST00000383955 105 ntBASIC3.5□□□□□ -1.85
COPAP53621 RNA5SP219-201ENST00000390940 113 ntBASIC3.5□□□□□ -1.85
COPAP53621 RNA5SP31-201ENST00000411144 127 ntBASIC3.5□□□□□ -1.85
COPAP53621 BX682237.1-201ENST00000415016 335 ntBASIC3.5□□□□□ -1.85
COPAP53621 USP9YP20-201ENST00000419224 558 ntBASIC3.5□□□□□ -1.85
COPAP53621 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.5□□□□□ -1.85
COPAP53621 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.5□□□□□ -1.85
COPAP53621 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.5□□□□□ -1.85
COPAP53621 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.5□□□□□ -1.85
COPAP53621 PRPS1P1-201ENST00000445305 876 ntBASIC3.5□□□□□ -1.85
COPAP53621 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.5□□□□□ -1.85
COPAP53621 AL031183.1-201ENST00000457667 207 ntBASIC3.5□□□□□ -1.85
COPAP53621 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.5□□□□□ -1.85
COPAP53621 FAM206BP-201ENST00000510179 541 ntBASIC3.5□□□□□ -1.85
COPAP53621 RNU4-49P-201ENST00000516080 140 ntBASIC3.5□□□□□ -1.85
COPAP53621 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.5□□□□□ -1.85
COPAP53621 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COPAP53621 VN1R80P-201ENST00000597126 338 ntBASIC3.5□□□□□ -1.85
COPAP53621 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.5□□□□□ -1.85
COPAP53621 AC004832.5-201ENST00000608677 401 ntBASIC3.5□□□□□ -1.85
COPAP53621 AC069234.5-201ENST00000611056 416 ntBASIC3.5□□□□□ -1.85
COPAP53621 uc_338.5-201ENST00000611839 155 ntBASIC3.5□□□□□ -1.85
COPAP53621 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.5□□□□□ -1.85
COPAP53621 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.5□□□□□ -1.85
COPAP53621 AC073308.1-201ENST00000623696 305 ntBASIC3.5□□□□□ -1.85
COPAP53621 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COPAP53621 AC121333.1-201ENST00000567488 2709 ntBASIC3.5□□□□□ -1.85
COPAP53621 AP003122.5-201ENST00000527668 3766 ntBASIC3.5□□□□□ -1.85
COPAP53621 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
COPAP53621 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
COPAP53621 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
COPAP53621 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.5□□□□□ -1.85
COPAP53621 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COPAP53621 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
COPAP53621 EIF4E2P1-201ENST00000393781 255 ntBASIC3.49□□□□□ -1.85
COPAP53621 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.49□□□□□ -1.85
COPAP53621 RNU6-1148P-201ENST00000410992 104 ntBASIC3.49□□□□□ -1.85
COPAP53621 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.49□□□□□ -1.85
COPAP53621 MTND3P8-201ENST00000412909 339 ntBASIC3.49□□□□□ -1.85
COPAP53621 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.49□□□□□ -1.85
COPAP53621 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.49□□□□□ -1.85
COPAP53621 AL360271.2-201ENST00000447710 161 ntBASIC3.49□□□□□ -1.85
COPAP53621 RNU7-167P-201ENST00000459160 62 ntBASIC3.49□□□□□ -1.85
COPAP53621 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.49□□□□□ -1.85
COPAP53621 RN7SL594P-201ENST00000470590 287 ntBASIC3.49□□□□□ -1.85
COPAP53621 RPL21P93-201ENST00000480465 489 ntBASIC3.49□□□□□ -1.85
COPAP53621 AC022493.1-201ENST00000492984 337 ntBASIC3.49□□□□□ -1.85
COPAP53621 MTND3P22-201ENST00000510932 243 ntBASIC3.49□□□□□ -1.85
COPAP53621 RNU7-30P-201ENST00000516835 62 ntBASIC3.49□□□□□ -1.85
COPAP53621 AC025755.1-201ENST00000521306 278 ntBASIC3.49□□□□□ -1.85
COPAP53621 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.49□□□□□ -1.85
COPAP53621 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.49□□□□□ -1.85
COPAP53621 HIGD1AP1-201ENST00000550979 275 ntBASIC3.49□□□□□ -1.85
COPAP53621 AMZ2P1-203ENST00000565833 850 ntBASIC3.49□□□□□ -1.85
COPAP53621 AC005498.1-201ENST00000592125 465 ntBASIC3.49□□□□□ -1.85
COPAP53621 AC005000.2-201ENST00000605468 310 ntBASIC3.49□□□□□ -1.85
COPAP53621 MIR7112-201ENST00000616126 65 ntBASIC3.49□□□□□ -1.85
COPAP53621 AC022418.1-201ENST00000624118 445 ntBASIC3.49□□□□□ -1.85
COPAP53621 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.49□□□□□ -1.85
COPAP53621 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COPAP53621 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COPAP53621 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms