Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 MIR301A-201ENST00000385261 86 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 MIR888-201ENST00000401186 77 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 AL356776.1-201ENST00000406574 447 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 RNU2-9P-201ENST00000410194 145 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 RNA5SP118-201ENST00000410385 109 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCN3P51790 AL139281.1-201ENST00000422120 335 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.12□□□□□ -1.91
CLCN3P51790 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 SNRPEP9-201ENST00000436794 238 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 SEPT14P3-201ENST00000439401 183 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCN3P51790 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCN3P51790 AL732372.2-207ENST00000445840 183 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 SEPT14P2-201ENST00000453405 183 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCN3P51790 GMFBP1-201ENST00000467831 427 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 HMGN2P13-201ENST00000476476 274 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCN3P51790 SEPT14P4-201ENST00000513445 186 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 AC105417.1-201ENST00000514691 285 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 Y_RNA.689-201ENST00000516589 107 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCN3P51790 FO082796.1-201ENST00000523795 183 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLCN3P51790 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCN3P51790 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.12□□□□□ -1.91
CLCN3P51790 TRAV37-201ENST00000553906 342 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.12□□□□□ -1.91
CLCN3P51790 AC024940.5-201ENST00000622889 474 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.12□□□□□ -1.91
CLCN3P51790 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLCN3P51790 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLCN3P51790 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLCN3P51790 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLCN3P51790 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CLCN3P51790 RNU6-512P-201ENST00000364438 103 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CLCN3P51790 OR9R1P-201ENST00000412200 877 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCN3P51790 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCN3P51790 RPL21P111-201ENST00000418453 477 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 SRIP2-201ENST00000428470 166 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 RPL36AP53-201ENST00000432891 316 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 SNRPEP8-201ENST00000442866 260 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 AC073415.1-201ENST00000449240 153 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCN3P51790 RN7SL75P-201ENST00000461926 281 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.11□□□□□ -1.91
CLCN3P51790 AP000852.1-201ENST00000472460 573 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 AC026801.1-201ENST00000497178 464 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 AC098799.2-201ENST00000509466 868 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 RNU6-914P-201ENST00000516749 109 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 SNORD59.2-201ENST00000516873 68 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 RNU6-685P-201ENST00000517088 95 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.11□□□□□ -1.91
CLCN3P51790 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.11□□□□□ -1.91
CLCN3P51790 AC008521.1-201ENST00000587471 187 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 AC009994.1-201ENST00000606889 253 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 AC104985.2-201ENST00000620598 500 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 U6.114-201ENST00000636407 96 ntBASIC3.11□□□□□ -1.91
CLCN3P51790 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.11□□□□□ -1.91
CLCN3P51790 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.11□□□□□ -1.91
CLCN3P51790 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
CLCN3P51790 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.11□□□□□ -1.91
CLCN3P51790 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLCN3P51790 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CLCN3P51790 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLCN3P51790 GABRG2-229ENST00000641017 3628 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLCN3P51790 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.1□□□□□ -1.91
CLCN3P51790 AC062016.1-201ENST00000355719 319 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 Y_RNA.70-201ENST00000362886 110 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 RNU1-112P-201ENST00000364401 164 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 Y_RNA.255-201ENST00000364581 97 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 SNORD115-7-201ENST00000365306 82 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CLCN3P51790 RNU2-68P-201ENST00000410878 191 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 RNU6-1068P-201ENST00000410958 103 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 RN7SKP58-201ENST00000411010 305 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLCN3P51790 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCN3P51790 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.1□□□□□ -1.91
CLCN3P51790 FABP5P13-201ENST00000452144 328 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCN3P51790 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCN3P51790 AC092798.1-201ENST00000458542 409 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 RPS15AP34-201ENST00000487776 387 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 AC091951.2-201ENST00000500762 203 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CLCN3P51790 AC008549.1-201ENST00000512900 643 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 RN7SKP219-201ENST00000516825 296 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 RNU6-711P-201ENST00000517255 106 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCN3P51790 AC245166.1-201ENST00000521012 253 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 RANP3-201ENST00000530970 276 ntBASIC3.1□□□□□ -1.91
CLCN3P51790 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms