Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC139792.2-201ENST00000624218 587 ntBASIC2.68□□□□□ -1.98
NEDD4P46934 AC068880.5-201ENST00000624331 290 ntBASIC2.68□□□□□ -1.98
NEDD4P46934 AC009161.2-201ENST00000624626 138 ntBASIC2.68□□□□□ -1.98
NEDD4P46934 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.68□□□□□ -1.98
NEDD4P46934 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.67□□□□□ -1.98
NEDD4P46934 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.67□□□□□ -1.98
NEDD4P46934 MTND5P17-201ENST00000418405 1603 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
NEDD4P46934 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.67□□□□□ -1.98
NEDD4P46934 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.67□□□□□ -1.98
NEDD4P46934 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NEDD4P46934 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.67□□□□□ -1.98
NEDD4P46934 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NEDD4P46934 RNU6-270P-201ENST00000364131 105 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 SNORA14A-201ENST00000364773 135 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 RNU6-259P-201ENST00000383999 107 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 RNA5SP508-201ENST00000411327 119 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.67□□□□□ -1.98
NEDD4P46934 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.67□□□□□ -1.98
NEDD4P46934 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.67□□□□□ -1.98
NEDD4P46934 AC093106.2-201ENST00000428212 385 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.67□□□□□ -1.98
NEDD4P46934 MTCO2P11-201ENST00000431069 680 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 GPM6BP2-201ENST00000432046 144 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 AL358934.1-201ENST00000432346 324 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.67□□□□□ -1.98
NEDD4P46934 GPM6BP1-201ENST00000446387 144 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 RPL23AP20-201ENST00000447965 421 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 HMGB1P29-201ENST00000505659 499 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 AC116562.3-201ENST00000506136 177 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.67□□□□□ -1.98
NEDD4P46934 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 RNU6-928P-201ENST00000516876 104 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 AC068587.5-201ENST00000528506 175 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.67□□□□□ -1.98
NEDD4P46934 AC009063.1-201ENST00000563342 702 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 BNIP3P9-201ENST00000603714 553 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 AC090617.7-201ENST00000623952 126 ntBASIC2.67□□□□□ -1.98
NEDD4P46934 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
NEDD4P46934 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NEDD4P46934 AC009487.4-201ENST00000624969 3585 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 ZNF720P1-201ENST00000562403 1939 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 AC010680.1-201ENST00000590024 3590 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 RNU6-512P-201ENST00000364438 103 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 Y_RNA.296-201ENST00000364930 108 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 RNU6-282P-201ENST00000365357 103 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 RNU6-190P-201ENST00000384154 102 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 RNU6-74P-201ENST00000384235 107 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 MIR221-201ENST00000385135 110 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
NEDD4P46934 RNU6-387P-201ENST00000411331 105 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.66□□□□□ -1.98
NEDD4P46934 AL109913.1-201ENST00000421173 514 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 HSPE1P1-201ENST00000421494 318 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.66□□□□□ -1.98
NEDD4P46934 SNRPEP9-201ENST00000436794 238 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 RPL32P28-201ENST00000443577 397 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 FABP5P15-201ENST00000453566 214 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 MTCYBP1-201ENST00000454315 1119 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 AC010099.1-201ENST00000455434 375 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 AC093899.1-201ENST00000457984 376 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 TPTE2P5-203ENST00000458118 728 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 ARL4AP2-201ENST00000507378 601 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 Y_RNA.655-201ENST00000515919 96 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 RNA5SP471-201ENST00000516971 106 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 RNU6-56P-201ENST00000516986 93 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 OR5B19P-201ENST00000531766 928 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 AC009163.5-201ENST00000575421 637 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.66□□□□□ -1.98
NEDD4P46934 MIR3124-201ENST00000582636 67 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.66□□□□□ -1.98
NEDD4P46934 AL136363.2-201ENST00000604173 851 ntBASIC2.66□□□□□ -1.98
NEDD4P46934 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NEDD4P46934 MTND5P26-201ENST00000426018 1752 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
NEDD4P46934 RNU6-179P-201ENST00000363350 107 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 RNU6-456P-201ENST00000384493 107 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 AC114491.1-201ENST00000416095 246 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.65□□□□□ -1.99
NEDD4P46934 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.65□□□□□ -1.99
NEDD4P46934 AC092427.1-202ENST00000430569 476 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 RPL23AP30-201ENST00000432419 501 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 AL591212.2-201ENST00000433923 257 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 MTATP6P16-201ENST00000434543 526 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.65□□□□□ -1.99
NEDD4P46934 MTND2P33-201ENST00000506452 1031 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 AC108078.1-201ENST00000508073 725 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.65□□□□□ -1.99
NEDD4P46934 SNORD27.1-201ENST00000516319 72 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NEDD4P46934 AC087241.2-201ENST00000535801 324 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 AC024619.4-201ENST00000580924 316 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.65□□□□□ -1.99
NEDD4P46934 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.65□□□□□ -1.99
NEDD4P46934 AL359547.2-201ENST00000615810 418 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 AC015540.1-201ENST00000615828 501 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.65□□□□□ -1.99
NEDD4P46934 AC073308.1-201ENST00000623696 305 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 AC064859.1-201ENST00000624741 174 ntBASIC2.65□□□□□ -1.99
NEDD4P46934 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms