Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MIR892C-201ENST00000516410 77 ntBASIC0.17□□□□□ -2.38
HTTP42858 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.17□□□□□ -2.38
HTTP42858 AC019131.2-201ENST00000609071 870 ntBASIC0.17□□□□□ -2.38
HTTP42858 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.17□□□□□ -2.38
HTTP42858 AL161629.2-201ENST00000615347 275 ntBASIC0.17□□□□□ -2.38
HTTP42858 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.17□□□□□ -2.38
HTTP42858 MIR30A-201ENST00000385092 71 ntBASIC0.16□□□□□ -2.38
HTTP42858 RNA5SP212-201ENST00000391223 107 ntBASIC0.16□□□□□ -2.38
HTTP42858 MTND1P16-201ENST00000465177 898 ntBASIC0.16□□□□□ -2.38
HTTP42858 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.16□□□□□ -2.38
HTTP42858 Y_RNA.659-201ENST00000515994 113 ntBASIC0.16□□□□□ -2.38
HTTP42858 RNY1P9-201ENST00000532431 109 ntBASIC0.16□□□□□ -2.38
HTTP42858 AC010186.2-204ENST00000537668 439 ntBASIC0.16□□□□□ -2.38
HTTP42858 CENPUP2-201ENST00000555897 1186 ntBASIC0.16□□□□□ -2.38
HTTP42858 MIR4305-201ENST00000583252 102 ntBASIC0.16□□□□□ -2.38
HTTP42858 AC079395.3-201ENST00000615161 484 ntBASIC0.16□□□□□ -2.38
HTTP42858 AC090132.2-201ENST00000615881 347 ntBASIC0.16□□□□□ -2.38
HTTP42858 MTND5P30-201ENST00000452896 1731 ntBASIC0.16□□□□□ -2.38
HTTP42858 MIR19B1-201ENST00000384829 87 ntBASIC0.16□□□□□ -2.38
HTTP42858 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
HTTP42858 RPL21P32-201ENST00000419877 477 ntBASIC0.16□□□□□ -2.38
HTTP42858 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.16□□□□□ -2.38
HTTP42858 RN7SKP5-201ENST00000517045 272 ntBASIC0.16□□□□□ -2.38
HTTP42858 AC005832.3-201ENST00000537929 631 ntBASIC0.16□□□□□ -2.38
HTTP42858 MIR4667-201ENST00000578933 66 ntBASIC0.16□□□□□ -2.38
HTTP42858 uc_338.17-201ENST00000619633 179 ntBASIC0.16□□□□□ -2.38
HTTP42858 AC099654.5-201ENST00000636479 350 ntBASIC0.16□□□□□ -2.38
HTTP42858 FAM157B-203ENST00000639350 358 ntBASIC0.16□□□□□ -2.38
HTTP42858 CR848007.1-201ENST00000442354 1699 ntBASIC0.16□□□□□ -2.38
HTTP42858 GDI2P1-201ENST00000429312 1336 ntBASIC0.16□□□□□ -2.38
HTTP42858 SEPT2P1-201ENST00000419651 180 ntBASIC0.16□□□□□ -2.38
HTTP42858 AC013410.2-201ENST00000422627 201 ntBASIC0.16□□□□□ -2.38
HTTP42858 OR51AB1P-201ENST00000429046 620 ntBASIC0.16□□□□□ -2.38
HTTP42858 RPL37P21-201ENST00000435890 276 ntBASIC0.16□□□□□ -2.38
HTTP42858 RPS15AP27-201ENST00000449183 343 ntBASIC0.16□□□□□ -2.38
HTTP42858 RPL22P13-201ENST00000493291 347 ntBASIC0.16□□□□□ -2.38
HTTP42858 RNA5SP165-201ENST00000517142 115 ntBASIC0.16□□□□□ -2.38
HTTP42858 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.16□□□□□ -2.38
HTTP42858 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.16□□□□□ -2.38
HTTP42858 AC069304.3-201ENST00000603938 1084 ntBASIC0.16□□□□□ -2.38
HTTP42858 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.16□□□□□ -2.38
HTTP42858 U3.20-201ENST00000390909 217 ntBASIC0.15□□□□□ -2.39
HTTP42858 RNU2-64P-201ENST00000411315 191 ntBASIC0.15□□□□□ -2.39
HTTP42858 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.15□□□□□ -2.39
HTTP42858 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.15□□□□□ -2.39
HTTP42858 UBE2D3P2-201ENST00000424409 445 ntBASIC0.15□□□□□ -2.39
HTTP42858 AC241584.1-201ENST00000438469 1241 ntBASIC0.15□□□□□ -2.39
HTTP42858 OR52A4P-202ENST00000481634 799 ntBASIC0.15□□□□□ -2.39
HTTP42858 AC112206.3-201ENST00000514578 389 ntBASIC0.15□□□□□ -2.39
HTTP42858 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
HTTP42858 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.15□□□□□ -2.39
HTTP42858 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.15□□□□□ -2.39
HTTP42858 AL365204.3-201ENST00000612448 685 ntBASIC0.15□□□□□ -2.39
HTTP42858 AL590410.1-201ENST00000617925 333 ntBASIC0.15□□□□□ -2.39
HTTP42858 AC139769.3-201ENST00000618383 175 ntBASIC0.15□□□□□ -2.39
HTTP42858 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.15□□□□□ -2.39
HTTP42858 AC091925.2-201ENST00000625059 256 ntBASIC0.15□□□□□ -2.39
HTTP42858 MIR6516-201ENST00000630554 81 ntBASIC0.15□□□□□ -2.39
HTTP42858 AC096656.1-201ENST00000623826 1364 ntBASIC0.15□□□□□ -2.39
HTTP42858 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.15□□□□□ -2.39
HTTP42858 SNORA51.10-201ENST00000384418 136 ntBASIC0.15□□□□□ -2.39
HTTP42858 Y_RNA.514-201ENST00000384528 112 ntBASIC0.15□□□□□ -2.39
HTTP42858 AC069282.1-201ENST00000411911 526 ntBASIC0.15□□□□□ -2.39
HTTP42858 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.15□□□□□ -2.39
HTTP42858 RPL7L1P10-201ENST00000427790 463 ntBASIC0.15□□□□□ -2.39
HTTP42858 RPL31P3-201ENST00000458430 332 ntBASIC0.15□□□□□ -2.39
HTTP42858 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.15□□□□□ -2.39
HTTP42858 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.15□□□□□ -2.39
HTTP42858 AP003049.1-201ENST00000529418 457 ntBASIC0.15□□□□□ -2.39
HTTP42858 AP003122.4-201ENST00000530980 758 ntBASIC0.15□□□□□ -2.39
HTTP42858 AL158211.1-201ENST00000566763 763 ntBASIC0.15□□□□□ -2.39
HTTP42858 MIR4768-201ENST00000585270 74 ntBASIC0.15□□□□□ -2.39
HTTP42858 NIFKP6-201ENST00000598115 845 ntBASIC0.15□□□□□ -2.39
HTTP42858 AC018755.4-201ENST00000619715 454 ntBASIC0.15□□□□□ -2.39
HTTP42858 MIR8065-201ENST00000620577 100 ntBASIC0.15□□□□□ -2.39
HTTP42858 Y_RNA.559-201ENST00000384686 107 ntBASIC0.14□□□□□ -2.39
HTTP42858 AL589655.1-201ENST00000405398 482 ntBASIC0.14□□□□□ -2.39
HTTP42858 AC009518.2-201ENST00000418056 731 ntBASIC0.14□□□□□ -2.39
HTTP42858 MTCYBP24-201ENST00000420387 1106 ntBASIC0.14□□□□□ -2.39
HTTP42858 AC016717.1-201ENST00000448918 286 ntBASIC0.14□□□□□ -2.39
HTTP42858 MTND2P8-201ENST00000450555 1025 ntBASIC0.14□□□□□ -2.39
HTTP42858 SETP11-201ENST00000473027 690 ntBASIC0.14□□□□□ -2.39
HTTP42858 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.14□□□□□ -2.39
HTTP42858 MRPS36P2-201ENST00000512569 299 ntBASIC0.14□□□□□ -2.39
HTTP42858 CIR1P1-201ENST00000524055 1133 ntBASIC0.14□□□□□ -2.39
HTTP42858 AP004371.1-201ENST00000525240 214 ntBASIC0.14□□□□□ -2.39
HTTP42858 MIR3678-201ENST00000578455 94 ntBASIC0.14□□□□□ -2.39
HTTP42858 MIR4422-201ENST00000581938 83 ntBASIC0.14□□□□□ -2.39
HTTP42858 MIR4713-201ENST00000582691 75 ntBASIC0.14□□□□□ -2.39
HTTP42858 AC015849.6-201ENST00000605454 474 ntBASIC0.14□□□□□ -2.39
HTTP42858 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
HTTP42858 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.14□□□□□ -2.39
HTTP42858 EDDM3CP-201ENST00000415977 425 ntBASIC0.14□□□□□ -2.39
HTTP42858 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.14□□□□□ -2.39
HTTP42858 MTCYBP34-201ENST00000439552 670 ntBASIC0.14□□□□□ -2.39
HTTP42858 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.14□□□□□ -2.39
HTTP42858 RNU7-26P-201ENST00000458980 63 ntBASIC0.14□□□□□ -2.39
HTTP42858 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.14□□□□□ -2.39
HTTP42858 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.14□□□□□ -2.39
HTTP42858 AC100812.1-201ENST00000607622 580 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms