Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ADI1P3-201ENST00000549509 470 ntBASIC2.77□□□□□ -1.97
CDH3P22223 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH3P22223 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.77□□□□□ -1.97
CDH3P22223 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH3P22223 TPRKBP2-201ENST00000565969 475 ntBASIC2.77□□□□□ -1.97
CDH3P22223 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDH3P22223 AC024153.1-201ENST00000603103 365 ntBASIC2.77□□□□□ -1.97
CDH3P22223 AC080078.2-201ENST00000603766 501 ntBASIC2.77□□□□□ -1.97
CDH3P22223 AP001330.5-201ENST00000607176 411 ntBASIC2.77□□□□□ -1.97
CDH3P22223 AC008536.2-201ENST00000607284 349 ntBASIC2.77□□□□□ -1.97
CDH3P22223 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.77□□□□□ -1.97
CDH3P22223 SEPT14P19-203ENST00000633205 211 ntBASIC2.77□□□□□ -1.97
CDH3P22223 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.77□□□□□ -1.97
CDH3P22223 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDH3P22223 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH3P22223 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH3P22223 AL035425.3-201ENST00000564206 4996 ntBASIC2.76□□□□□ -1.97
CDH3P22223 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.76□□□□□ -1.97
CDH3P22223 Y_RNA.111-201ENST00000363248 100 ntBASIC2.76□□□□□ -1.97
CDH3P22223 RNU6-1029P-201ENST00000384109 107 ntBASIC2.76□□□□□ -1.97
CDH3P22223 SNORA18.3-201ENST00000384122 132 ntBASIC2.76□□□□□ -1.97
CDH3P22223 AL591416.1-201ENST00000404015 867 ntBASIC2.76□□□□□ -1.97
CDH3P22223 RNU6-387P-201ENST00000411331 105 ntBASIC2.76□□□□□ -1.97
CDH3P22223 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH3P22223 AC080125.1-201ENST00000414888 684 ntBASIC2.76□□□□□ -1.97
CDH3P22223 MTCYBP5-201ENST00000423752 1135 ntBASIC2.76□□□□□ -1.97
CDH3P22223 AC087499.2-201ENST00000432861 149 ntBASIC2.76□□□□□ -1.97
CDH3P22223 RPL36AP53-201ENST00000432891 316 ntBASIC2.76□□□□□ -1.97
CDH3P22223 MTND3P21-201ENST00000433774 331 ntBASIC2.76□□□□□ -1.97
CDH3P22223 AL714022.1-201ENST00000439897 151 ntBASIC2.76□□□□□ -1.97
CDH3P22223 FDX1P2-201ENST00000450769 375 ntBASIC2.76□□□□□ -1.97
CDH3P22223 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH3P22223 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH3P22223 RPL23AP70-201ENST00000483361 460 ntBASIC2.76□□□□□ -1.97
CDH3P22223 AC139453.3-201ENST00000493276 369 ntBASIC2.76□□□□□ -1.97
CDH3P22223 AC092436.1-201ENST00000506450 503 ntBASIC2.76□□□□□ -1.97
CDH3P22223 AC117522.3-201ENST00000507974 584 ntBASIC2.76□□□□□ -1.97
CDH3P22223 AC009646.1-201ENST00000510455 318 ntBASIC2.76□□□□□ -1.97
CDH3P22223 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH3P22223 AC091826.1-201ENST00000514065 313 ntBASIC2.76□□□□□ -1.97
CDH3P22223 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.76□□□□□ -1.97
CDH3P22223 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH3P22223 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH3P22223 AC008752.3-201ENST00000588113 712 ntBASIC2.76□□□□□ -1.97
CDH3P22223 ELOCP29-201ENST00000588193 334 ntBASIC2.76□□□□□ -1.97
CDH3P22223 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH3P22223 RPL12P50-201ENST00000603116 116 ntBASIC2.76□□□□□ -1.97
CDH3P22223 AC012507.3-201ENST00000603556 477 ntBASIC2.76□□□□□ -1.97
CDH3P22223 AL033523.1-201ENST00000605153 153 ntBASIC2.76□□□□□ -1.97
CDH3P22223 AP001596.2-201ENST00000608410 312 ntBASIC2.76□□□□□ -1.97
CDH3P22223 AC073308.1-201ENST00000623696 305 ntBASIC2.76□□□□□ -1.97
CDH3P22223 AL512643.1-201ENST00000635735 524 ntBASIC2.76□□□□□ -1.97
CDH3P22223 U2.21-201ENST00000637295 81 ntBASIC2.76□□□□□ -1.97
CDH3P22223 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH3P22223 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH3P22223 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CDH3P22223 MAPK10-266ENST00000641066 6555 ntBASIC2.76□□□□□ -1.97
CDH3P22223 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDH3P22223 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDH3P22223 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH3P22223 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH3P22223 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CDH3P22223 MIR767-201ENST00000390228 109 ntBASIC2.75□□□□□ -1.97
CDH3P22223 RNU2-68P-201ENST00000410878 191 ntBASIC2.75□□□□□ -1.97
CDH3P22223 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH3P22223 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDH3P22223 AL160275.3-201ENST00000423876 471 ntBASIC2.75□□□□□ -1.97
CDH3P22223 MTCO3P30-201ENST00000426425 670 ntBASIC2.75□□□□□ -1.97
CDH3P22223 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH3P22223 RPS29P6-201ENST00000438196 145 ntBASIC2.75□□□□□ -1.97
CDH3P22223 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH3P22223 AL118520.1-201ENST00000450770 291 ntBASIC2.75□□□□□ -1.97
CDH3P22223 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.75□□□□□ -1.97
CDH3P22223 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH3P22223 AC027673.1-201ENST00000456245 405 ntBASIC2.75□□□□□ -1.97
CDH3P22223 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH3P22223 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH3P22223 SRRM1P2-201ENST00000464531 1192 ntBASIC2.75□□□□□ -1.97
CDH3P22223 AC090525.1-201ENST00000479116 478 ntBASIC2.75□□□□□ -1.97
CDH3P22223 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH3P22223 AC104806.1-201ENST00000508720 308 ntBASIC2.75□□□□□ -1.97
CDH3P22223 HIGD1AP13-201ENST00000509878 289 ntBASIC2.75□□□□□ -1.97
CDH3P22223 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.75□□□□□ -1.97
CDH3P22223 RNA5SP503-201ENST00000517047 117 ntBASIC2.75□□□□□ -1.97
CDH3P22223 RNU6-1315P-201ENST00000517187 99 ntBASIC2.75□□□□□ -1.97
CDH3P22223 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDH3P22223 AP005435.4-201ENST00000529514 284 ntBASIC2.75□□□□□ -1.97
CDH3P22223 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH3P22223 AK6P1-201ENST00000540219 478 ntBASIC2.75□□□□□ -1.97
CDH3P22223 AL391261.3-201ENST00000557194 520 ntBASIC2.75□□□□□ -1.97
CDH3P22223 MIR4703-201ENST00000577728 79 ntBASIC2.75□□□□□ -1.97
CDH3P22223 MTATP6P3-201ENST00000581686 676 ntBASIC2.75□□□□□ -1.97
CDH3P22223 DEFB131E-202ENST00000602581 683 ntBASIC2.75□□□□□ -1.97
CDH3P22223 UCA1.1-201ENST00000620952 75 ntBASIC2.75□□□□□ -1.97
CDH3P22223 CR381653.2-201ENST00000624041 768 ntBASIC2.75□□□□□ -1.97
CDH3P22223 U6.114-201ENST00000636407 96 ntBASIC2.75□□□□□ -1.97
CDH3P22223 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDH3P22223 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH3P22223 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH3P22223 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms