Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AL356280.1-201ENST00000603614 379 ntBASIC2.62□□□□□ -1.99
VIMP08670 AC109347.2-201ENST00000610220 349 ntBASIC2.62□□□□□ -1.99
VIMP08670 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.62□□□□□ -1.99
VIMP08670 HSPA8P4-201ENST00000511877 1920 ntBASIC2.62□□□□□ -1.99
VIMP08670 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.61□□□□□ -1.99
VIMP08670 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
VIMP08670 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.61□□□□□ -1.99
VIMP08670 MIR412-201ENST00000362142 91 ntBASIC2.61□□□□□ -1.99
VIMP08670 RNU6-181P-201ENST00000363225 107 ntBASIC2.61□□□□□ -1.99
VIMP08670 RNU1-100P-201ENST00000365255 165 ntBASIC2.61□□□□□ -1.99
VIMP08670 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.61□□□□□ -1.99
VIMP08670 RNU6-456P-201ENST00000384493 107 ntBASIC2.61□□□□□ -1.99
VIMP08670 U3.37-201ENST00000408528 213 ntBASIC2.61□□□□□ -1.99
VIMP08670 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.61□□□□□ -1.99
VIMP08670 MTCO2P34-201ENST00000421994 607 ntBASIC2.61□□□□□ -1.99
VIMP08670 AL365338.1-201ENST00000422282 858 ntBASIC2.61□□□□□ -1.99
VIMP08670 Z98742.2-201ENST00000431564 187 ntBASIC2.61□□□□□ -1.99
VIMP08670 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.61□□□□□ -1.99
VIMP08670 AL358934.1-201ENST00000432346 324 ntBASIC2.61□□□□□ -1.99
VIMP08670 MTCO3P5-201ENST00000433620 714 ntBASIC2.61□□□□□ -1.99
VIMP08670 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.61□□□□□ -1.99
VIMP08670 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.61□□□□□ -1.99
VIMP08670 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VIMP08670 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.61□□□□□ -1.99
VIMP08670 AP001324.2-201ENST00000461163 319 ntBASIC2.61□□□□□ -1.99
VIMP08670 AC117522.2-201ENST00000510049 657 ntBASIC2.61□□□□□ -1.99
VIMP08670 RNU6-445P-201ENST00000516949 107 ntBASIC2.61□□□□□ -1.99
VIMP08670 RNU6-430P-201ENST00000517078 107 ntBASIC2.61□□□□□ -1.99
VIMP08670 CKS1BP7-201ENST00000522230 235 ntBASIC2.61□□□□□ -1.99
VIMP08670 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.61□□□□□ -1.99
VIMP08670 AC234778.2-201ENST00000566241 354 ntBASIC2.61□□□□□ -1.99
VIMP08670 AC092325.1-201ENST00000566449 554 ntBASIC2.61□□□□□ -1.99
VIMP08670 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.61□□□□□ -1.99
VIMP08670 MIR5694-201ENST00000581190 76 ntBASIC2.61□□□□□ -1.99
VIMP08670 MIR3199-1-201ENST00000582434 88 ntBASIC2.61□□□□□ -1.99
VIMP08670 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
VIMP08670 RSL24D1P11-201ENST00000591045 491 ntBASIC2.61□□□□□ -1.99
VIMP08670 uc_338.14-201ENST00000613162 166 ntBASIC2.61□□□□□ -1.99
VIMP08670 U6.42-201ENST00000618440 107 ntBASIC2.61□□□□□ -1.99
VIMP08670 AC099842.1-201ENST00000619919 596 ntBASIC2.61□□□□□ -1.99
VIMP08670 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.61□□□□□ -1.99
VIMP08670 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.61□□□□□ -1.99
VIMP08670 U6.114-201ENST00000636407 96 ntBASIC2.61□□□□□ -1.99
VIMP08670 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.61□□□□□ -1.99
VIMP08670 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
VIMP08670 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.61□□□□□ -1.99
VIMP08670 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VIMP08670 AC007336.1-201ENST00000576365 3828 ntBASIC2.61□□□□□ -1.99
VIMP08670 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VIMP08670 AL390237.1-201ENST00000404226 1415 ntBASIC2.6□□□□□ -1.99
VIMP08670 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.6□□□□□ -1.99
VIMP08670 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VIMP08670 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VIMP08670 SNORD116-9-201ENST00000384000 95 ntBASIC2.6□□□□□ -1.99
VIMP08670 SNORD116-2-201ENST00000384274 95 ntBASIC2.6□□□□□ -1.99
VIMP08670 SNORD116-3-201ENST00000384287 95 ntBASIC2.6□□□□□ -1.99
VIMP08670 SNORD116-7-201ENST00000384404 95 ntBASIC2.6□□□□□ -1.99
VIMP08670 SNORD116-5-201ENST00000384462 95 ntBASIC2.6□□□□□ -1.99
VIMP08670 RNU6-1179P-201ENST00000384667 107 ntBASIC2.6□□□□□ -1.99
VIMP08670 SNORD116-6-201ENST00000384711 96 ntBASIC2.6□□□□□ -1.99
VIMP08670 MIR218-1-201ENST00000384999 110 ntBASIC2.6□□□□□ -1.99
VIMP08670 MIR454-201ENST00000390180 115 ntBASIC2.6□□□□□ -1.99
VIMP08670 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.6□□□□□ -1.99
VIMP08670 AL592148.1-201ENST00000413568 445 ntBASIC2.6□□□□□ -1.99
VIMP08670 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.6□□□□□ -1.99
VIMP08670 MTCYBP5-201ENST00000423752 1135 ntBASIC2.6□□□□□ -1.99
VIMP08670 CALM2P2-201ENST00000428512 440 ntBASIC2.6□□□□□ -1.99
VIMP08670 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.6□□□□□ -1.99
VIMP08670 MTND4P32-201ENST00000437189 1237 ntBASIC2.6□□□□□ -1.99
VIMP08670 FABP5P14-201ENST00000437273 393 ntBASIC2.6□□□□□ -1.99
VIMP08670 AL360221.1-201ENST00000445989 335 ntBASIC2.6□□□□□ -1.99
VIMP08670 C1DP4-201ENST00000455429 424 ntBASIC2.6□□□□□ -1.99
VIMP08670 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.6□□□□□ -1.99
VIMP08670 AL672167.3-201ENST00000465951 960 ntBASIC2.6□□□□□ -1.99
VIMP08670 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VIMP08670 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VIMP08670 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.6□□□□□ -1.99
VIMP08670 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.6□□□□□ -1.99
VIMP08670 SNORD27.1-201ENST00000516319 72 ntBASIC2.6□□□□□ -1.99
VIMP08670 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.6□□□□□ -1.99
VIMP08670 OR5BN1P-201ENST00000532955 829 ntBASIC2.6□□□□□ -1.99
VIMP08670 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.6□□□□□ -1.99
VIMP08670 AC006362.1-201ENST00000567392 174 ntBASIC2.6□□□□□ -1.99
VIMP08670 MIR4765-201ENST00000585007 77 ntBASIC2.6□□□□□ -1.99
VIMP08670 ATP1B3P1-201ENST00000605365 821 ntBASIC2.6□□□□□ -1.99
VIMP08670 AC087045.1-201ENST00000605856 382 ntBASIC2.6□□□□□ -1.99
VIMP08670 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.6□□□□□ -1.99
VIMP08670 MIR6798-201ENST00000612887 67 ntBASIC2.6□□□□□ -1.99
VIMP08670 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.6□□□□□ -1.99
VIMP08670 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
VIMP08670 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
VIMP08670 AC010378.1-201ENST00000619270 362 ntBASIC2.6□□□□□ -1.99
VIMP08670 AC011155.2-201ENST00000623202 216 ntBASIC2.6□□□□□ -1.99
VIMP08670 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.6□□□□□ -1.99
VIMP08670 AC090582.1-201ENST00000636321 199 ntBASIC2.6□□□□□ -1.99
VIMP08670 MTND4P27-201ENST00000450813 1354 ntBASIC2.6□□□□□ -1.99
VIMP08670 RNU6-371P-201ENST00000364283 108 ntBASIC2.59□□□□□ -1.99
VIMP08670 RNU6-116P-201ENST00000384042 109 ntBASIC2.59□□□□□ -1.99
VIMP08670 SNORD116-1-201ENST00000384335 95 ntBASIC2.59□□□□□ -1.99
VIMP08670 RNU6-748P-201ENST00000384648 107 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms