Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AC090186.1-201ENST00000605991 572 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AC126118.1-201ENST00000607744 628 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.38□□□□□ -2.19
HLA-DQB2P05538 Z99571.1-201ENST00000636677 394 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HLA-DQB2P05538 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HLA-DQB2P05538 RNU6-289P-201ENST00000364093 107 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AC127391.1-201ENST00000411737 98 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 MTND4P3-201ENST00000417829 541 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AC013262.1-201ENST00000426710 252 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DQB2P05538 RPS29P29-201ENST00000456396 171 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 RNU1-98P-201ENST00000458992 160 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 RNU7-95P-201ENST00000459222 64 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 MEMO1P3-201ENST00000459811 302 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AC112771.1-201ENST00000463581 102 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.37□□□□□ -2.19
HLA-DQB2P05538 RNU1-92P-201ENST00000517017 135 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 ACA59.2-201ENST00000517061 156 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DQB2P05538 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DQB2P05538 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AC022880.1-201ENST00000534017 973 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AC087894.1-201ENST00000538359 518 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 NDUFA5P6-201ENST00000542110 379 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AC060771.1-201ENST00000582031 164 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AC008507.2-201ENST00000588402 1176 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AC004987.4-201ENST00000603383 338 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 SEPT7P9-203ENST00000604116 343 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AC092953.2-201ENST00000608000 699 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DQB2P05538 AL158163.2-201ENST00000619110 700 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.37□□□□□ -2.19
HLA-DQB2P05538 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HLA-DQB2P05538 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.37□□□□□ -2.19
HLA-DQB2P05538 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
HLA-DQB2P05538 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 U8.3-201ENST00000363321 132 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 RNU6-777P-201ENST00000364265 104 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 RNU6-203P-201ENST00000384038 104 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 MIR561-201ENST00000385216 97 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 Y_RNA.578-201ENST00000390903 88 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 RNU6-482P-201ENST00000391068 107 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AC078974.1-201ENST00000411597 223 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 OR9R1P-201ENST00000412200 877 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 VN1R36P-201ENST00000414936 291 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 RPS15AP9-201ENST00000439856 381 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AL360221.1-201ENST00000445989 335 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AC104058.1-201ENST00000448028 297 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AL441985.1-201ENST00000457727 251 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 RNU1-123P-201ENST00000458950 160 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 RPL37P6-201ENST00000460682 294 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 RPL7P43-201ENST00000478876 753 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 RNU6-678P-201ENST00000516832 109 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AP003033.1-201ENST00000527244 415 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 MIR4285-201ENST00000581001 85 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AL512598.1-201ENST00000610158 273 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AP000676.3-201ENST00000623299 569 ntBASIC1.36□□□□□ -2.19
HLA-DQB2P05538 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HLA-DQB2P05538 RNU1-23P-201ENST00000363361 144 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 MIR19A-201ENST00000384878 82 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 SNORA40.19-201ENST00000390846 128 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AL133475.1-201ENST00000404414 305 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 MIR1302-8-201ENST00000408342 128 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AC074117.2-201ENST00000417130 397 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AC104651.1-201ENST00000427559 735 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AC005094.1-201ENST00000440420 368 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DQB2P05538 BRK1P2-201ENST00000442875 223 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 ELOCP30-201ENST00000447108 299 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DQB2P05538 RN7SKP210-201ENST00000459176 261 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AC004223.1-201ENST00000479840 271 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AC116655.1-201ENST00000508324 901 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 RNU6-970P-201ENST00000516312 107 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms