Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.8□□□□□ -2.12
CD74P04233 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.8□□□□□ -2.12
CD74P04233 ZNF90P2-204ENST00000419323 1075 ntBASIC1.8□□□□□ -2.12
CD74P04233 OOSP1P1-201ENST00000423265 274 ntBASIC1.8□□□□□ -2.12
CD74P04233 AIMP1P2-201ENST00000425294 312 ntBASIC1.8□□□□□ -2.12
CD74P04233 RPS3AP44-201ENST00000425466 790 ntBASIC1.8□□□□□ -2.12
CD74P04233 ISCA1P1-201ENST00000426679 387 ntBASIC1.8□□□□□ -2.12
CD74P04233 MTND5P25-201ENST00000430499 799 ntBASIC1.8□□□□□ -2.12
CD74P04233 UBE2D3P1-201ENST00000436669 444 ntBASIC1.8□□□□□ -2.12
CD74P04233 DYNLL1P5-201ENST00000467158 270 ntBASIC1.8□□□□□ -2.12
CD74P04233 AL121769.1-201ENST00000469473 401 ntBASIC1.8□□□□□ -2.12
CD74P04233 MTND1P3-201ENST00000484956 952 ntBASIC1.8□□□□□ -2.12
CD74P04233 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.8□□□□□ -2.12
CD74P04233 RNU6-143P-201ENST00000516942 93 ntBASIC1.8□□□□□ -2.12
CD74P04233 AC118273.2-201ENST00000532092 465 ntBASIC1.8□□□□□ -2.12
CD74P04233 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.8□□□□□ -2.12
CD74P04233 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.8□□□□□ -2.12
CD74P04233 AC090616.2-202ENST00000584248 222 ntBASIC1.8□□□□□ -2.12
CD74P04233 AC007229.1-201ENST00000590455 412 ntBASIC1.8□□□□□ -2.12
CD74P04233 BNIP3P9-201ENST00000603714 553 ntBASIC1.8□□□□□ -2.12
CD74P04233 AC103710.2-201ENST00000609912 942 ntBASIC1.8□□□□□ -2.12
CD74P04233 uc_338.14-201ENST00000613162 166 ntBASIC1.8□□□□□ -2.12
CD74P04233 DUXAP9-208ENST00000622815 614 ntBASIC1.8□□□□□ -2.12
CD74P04233 AC091932.3-201ENST00000624223 323 ntBASIC1.8□□□□□ -2.12
CD74P04233 PISRT1-201ENST00000626175 531 ntBASIC1.8□□□□□ -2.12
CD74P04233 AC008993.2-201ENST00000631744 806 ntBASIC1.8□□□□□ -2.12
CD74P04233 Z99571.1-201ENST00000636677 394 ntBASIC1.8□□□□□ -2.12
CD74P04233 U6.99-201ENST00000637524 83 ntBASIC1.8□□□□□ -2.12
CD74P04233 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
CD74P04233 ADAM3A-203ENST00000461344 2157 ntBASIC1.8□□□□□ -2.12
CD74P04233 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.8□□□□□ -2.12
CD74P04233 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.8□□□□□ -2.12
CD74P04233 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CD74P04233 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CD74P04233 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.79□□□□□ -2.12
CD74P04233 RNU6-511P-201ENST00000363496 107 ntBASIC1.79□□□□□ -2.12
CD74P04233 XGY1-201ENST00000381172 446 ntBASIC1.79□□□□□ -2.12
CD74P04233 RPL26P27-201ENST00000414397 437 ntBASIC1.79□□□□□ -2.12
CD74P04233 AC107081.1-201ENST00000414975 361 ntBASIC1.79□□□□□ -2.12
CD74P04233 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.79□□□□□ -2.12
CD74P04233 AC006366.1-201ENST00000422002 759 ntBASIC1.79□□□□□ -2.12
CD74P04233 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.79□□□□□ -2.12
CD74P04233 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.79□□□□□ -2.12
CD74P04233 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.79□□□□□ -2.12
CD74P04233 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.79□□□□□ -2.12
CD74P04233 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.79□□□□□ -2.12
CD74P04233 KATNBL1P6-201ENST00000453433 915 ntBASIC1.79□□□□□ -2.12
CD74P04233 AC093899.1-201ENST00000457984 376 ntBASIC1.79□□□□□ -2.12
CD74P04233 SNORD97-201ENST00000459187 142 ntBASIC1.79□□□□□ -2.12
CD74P04233 AP000797.1-201ENST00000478870 387 ntBASIC1.79□□□□□ -2.12
CD74P04233 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
CD74P04233 RNU6-232P-201ENST00000517144 64 ntBASIC1.79□□□□□ -2.12
CD74P04233 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.79□□□□□ -2.12
CD74P04233 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.79□□□□□ -2.12
CD74P04233 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.79□□□□□ -2.12
CD74P04233 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.79□□□□□ -2.12
CD74P04233 OR11H5P-201ENST00000554039 926 ntBASIC1.79□□□□□ -2.12
CD74P04233 AC091544.4-201ENST00000555268 342 ntBASIC1.79□□□□□ -2.12
CD74P04233 ROCK1P1-201ENST00000573767 549 ntBASIC1.79□□□□□ -2.12
CD74P04233 MIR3167-201ENST00000579623 85 ntBASIC1.79□□□□□ -2.12
CD74P04233 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.79□□□□□ -2.12
CD74P04233 AL670379.6-201ENST00000603753 252 ntBASIC1.79□□□□□ -2.12
CD74P04233 AL670379.11-201ENST00000604059 253 ntBASIC1.79□□□□□ -2.12
CD74P04233 AL358072.1-201ENST00000604156 575 ntBASIC1.79□□□□□ -2.12
CD74P04233 AC104763.2-201ENST00000604179 382 ntBASIC1.79□□□□□ -2.12
CD74P04233 AC008162.1-201ENST00000604718 254 ntBASIC1.79□□□□□ -2.12
CD74P04233 AL670379.1-201ENST00000604752 252 ntBASIC1.79□□□□□ -2.12
CD74P04233 AL670379.5-201ENST00000605253 252 ntBASIC1.79□□□□□ -2.12
CD74P04233 AL670379.12-201ENST00000605291 253 ntBASIC1.79□□□□□ -2.12
CD74P04233 AL670379.8-201ENST00000605353 252 ntBASIC1.79□□□□□ -2.12
CD74P04233 AL670379.7-201ENST00000605823 252 ntBASIC1.79□□□□□ -2.12
CD74P04233 AC018638.7-201ENST00000605836 1114 ntBASIC1.79□□□□□ -2.12
CD74P04233 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.79□□□□□ -2.12
CD74P04233 AC011939.3-201ENST00000613686 466 ntBASIC1.79□□□□□ -2.12
CD74P04233 AC130324.3-201ENST00000614165 542 ntBASIC1.79□□□□□ -2.12
CD74P04233 MIR7844-201ENST00000616161 122 ntBASIC1.79□□□□□ -2.12
CD74P04233 AC091304.6-201ENST00000619761 202 ntBASIC1.79□□□□□ -2.12
CD74P04233 MIR6132-201ENST00000622083 109 ntBASIC1.79□□□□□ -2.12
CD74P04233 AC025034.2-201ENST00000623264 286 ntBASIC1.79□□□□□ -2.12
CD74P04233 AF246928.1-201ENST00000623768 87 ntBASIC1.79□□□□□ -2.12
CD74P04233 AL512643.1-201ENST00000635735 524 ntBASIC1.79□□□□□ -2.12
CD74P04233 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CD74P04233 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CD74P04233 CENPCP1-201ENST00000533085 2578 ntBASIC1.79□□□□□ -2.12
CD74P04233 HSPA8P4-201ENST00000511877 1920 ntBASIC1.78□□□□□ -2.12
CD74P04233 RNU5E-5P-201ENST00000365379 116 ntBASIC1.78□□□□□ -2.12
CD74P04233 RNU5E-6P-201ENST00000365574 115 ntBASIC1.78□□□□□ -2.12
CD74P04233 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.78□□□□□ -2.12
CD74P04233 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CD74P04233 SUMO2P12-201ENST00000405924 140 ntBASIC1.78□□□□□ -2.12
CD74P04233 AC092809.3-201ENST00000415453 231 ntBASIC1.78□□□□□ -2.12
CD74P04233 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.78□□□□□ -2.12
CD74P04233 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.78□□□□□ -2.12
CD74P04233 BX276092.3-201ENST00000424182 230 ntBASIC1.78□□□□□ -2.12
CD74P04233 AC007283.2-201ENST00000424739 197 ntBASIC1.78□□□□□ -2.12
CD74P04233 AL356583.2-201ENST00000426536 280 ntBASIC1.78□□□□□ -2.12
CD74P04233 AL591212.2-201ENST00000433923 257 ntBASIC1.78□□□□□ -2.12
CD74P04233 AC119618.1-201ENST00000434191 222 ntBASIC1.78□□□□□ -2.12
CD74P04233 AC004383.1-201ENST00000438135 289 ntBASIC1.78□□□□□ -2.12
CD74P04233 AL139824.2-201ENST00000458731 1095 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms