Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 RNA5SP479-201ENST00000364858 117 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 SNORD116-11-201ENST00000383882 92 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 RNU2-41P-201ENST00000410991 178 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AC007390.1-201ENST00000415722 356 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 RPL7P10-201ENST00000417407 739 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 RPL7P37-201ENST00000425095 738 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AC092017.2-201ENST00000427600 362 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 TOMM20P4-201ENST00000427861 435 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AP000907.1-201ENST00000428428 510 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 MTND3P23-201ENST00000431980 347 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AMD1P1-201ENST00000457220 922 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 HMGN1P18-201ENST00000457642 277 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 RNU7-138P-201ENST00000459479 64 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AC010401.1-201ENST00000463867 348 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 RNU6-581P-201ENST00000516214 105 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AC069113.1-201ENST00000517763 267 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 COPS8P3-201ENST00000526024 482 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 C8orf59P2-201ENST00000603441 271 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AL132765.2-201ENST00000610812 351 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AC069234.5-201ENST00000611056 416 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AC011890.2-201ENST00000613393 294 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AL161629.2-201ENST00000615347 275 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AC099654.5-201ENST00000636479 350 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 U6.98-201ENST00000637157 84 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 AC017071.1-201ENST00000564407 2204 ntBASIC3.04□□□□□ -1.92
HLA-DQA2P01906 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA2P01906 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HLA-DQA2P01906 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
HLA-DQA2P01906 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DQA2P01906 MTND5P7-201ENST00000413558 1798 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HLA-DQA2P01906 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HLA-DQA2P01906 RNU6-797P-201ENST00000363101 109 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 RNU4-73P-201ENST00000363164 141 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 SNORD6-201ENST00000365444 73 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
HLA-DQA2P01906 AP002088.1-201ENST00000382740 395 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 MIR34A-201ENST00000385130 110 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 MIR1193-201ENST00000408109 78 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 MIR548F5-201ENST00000408421 86 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 NDUFS5P4-201ENST00000412983 318 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 AC093578.1-201ENST00000415219 368 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 BPY2DP-201ENST00000422208 265 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 AL445584.1-201ENST00000431451 330 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 BX679664.1-201ENST00000434429 253 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 HIGD1AP11-201ENST00000438361 280 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA2P01906 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA2P01906 AL031274.1-201ENST00000450334 232 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 RPS4XP2-201ENST00000458402 793 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 AC008526.1-201ENST00000509149 338 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 AC110768.1-201ENST00000509222 400 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 AC104619.4-201ENST00000510773 249 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 MTND3P22-201ENST00000510932 243 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 RN7SKP21-201ENST00000516503 220 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 MIR2276-201ENST00000516886 89 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 RNA5SP454-201ENST00000517231 127 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 RNU6-711P-201ENST00000517255 106 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 AC093027.1-201ENST00000546698 429 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 AC011611.1-201ENST00000552179 197 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 MIR4790-201ENST00000577799 79 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 MIR4474-201ENST00000579189 78 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DQA2P01906 ELOCP5-201ENST00000604924 333 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 AC064836.2-201ENST00000609491 462 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 AL355365.1-201ENST00000616480 294 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 AC138627.2-201ENST00000624202 601 ntBASIC3.03□□□□□ -1.92
HLA-DQA2P01906 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQA2P01906 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.03□□□□□ -1.92
HLA-DQA2P01906 AC093010.3-201ENST00000570269 15214 ntBASIC3.02□□□□□ -1.93
HLA-DQA2P01906 MTND4P29-201ENST00000503122 1372 ntBASIC3.02□□□□□ -1.93
HLA-DQA2P01906 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQA2P01906 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA2P01906 ZNF519P1-201ENST00000449011 1626 ntBASIC3.02□□□□□ -1.93
HLA-DQA2P01906 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQA2P01906 RNU1-75P-201ENST00000347264 129 ntBASIC3.02□□□□□ -1.93
HLA-DQA2P01906 RNU6-562P-201ENST00000362731 107 ntBASIC3.02□□□□□ -1.93
HLA-DQA2P01906 Y_RNA.58-201ENST00000362807 102 ntBASIC3.02□□□□□ -1.93
HLA-DQA2P01906 Y_RNA.154-201ENST00000363624 102 ntBASIC3.02□□□□□ -1.93
HLA-DQA2P01906 RNY3P1-201ENST00000365085 102 ntBASIC3.02□□□□□ -1.93
HLA-DQA2P01906 RNY3-201ENST00000365484 102 ntBASIC3.02□□□□□ -1.93
HLA-DQA2P01906 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 258.2 ms