Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 Y_RNA.154-201ENST00000363624 102 ntBASIC3.03□□□□□ -1.92
LDLRP01130 RNY3P1-201ENST00000365085 102 ntBASIC3.03□□□□□ -1.92
LDLRP01130 RNY3-201ENST00000365484 102 ntBASIC3.03□□□□□ -1.92
LDLRP01130 RNU6-108P-201ENST00000365558 107 ntBASIC3.03□□□□□ -1.92
LDLRP01130 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
LDLRP01130 SNORA69-201ENST00000383895 132 ntBASIC3.03□□□□□ -1.92
LDLRP01130 RNU6-1227P-201ENST00000383981 107 ntBASIC3.03□□□□□ -1.92
LDLRP01130 Y_RNA.490-201ENST00000384413 102 ntBASIC3.03□□□□□ -1.92
LDLRP01130 RNU6-692P-201ENST00000384496 107 ntBASIC3.03□□□□□ -1.92
LDLRP01130 SNORA44-201ENST00000384584 132 ntBASIC3.03□□□□□ -1.92
LDLRP01130 RNU6-14P-201ENST00000384630 106 ntBASIC3.03□□□□□ -1.92
LDLRP01130 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LDLRP01130 RNA5SP229-201ENST00000410809 99 ntBASIC3.03□□□□□ -1.92
LDLRP01130 RNU6-1068P-201ENST00000410958 103 ntBASIC3.03□□□□□ -1.92
LDLRP01130 Z85995.1-201ENST00000415547 335 ntBASIC3.03□□□□□ -1.92
LDLRP01130 MTATP6P18-201ENST00000417994 673 ntBASIC3.03□□□□□ -1.92
LDLRP01130 USP9YP20-201ENST00000419224 558 ntBASIC3.03□□□□□ -1.92
LDLRP01130 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.03□□□□□ -1.92
LDLRP01130 HMGB1P27-201ENST00000431429 603 ntBASIC3.03□□□□□ -1.92
LDLRP01130 AC079781.2-201ENST00000446424 169 ntBASIC3.03□□□□□ -1.92
LDLRP01130 FABP5P13-201ENST00000452144 328 ntBASIC3.03□□□□□ -1.92
LDLRP01130 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.03□□□□□ -1.92
LDLRP01130 HMGN1P13-201ENST00000505795 138 ntBASIC3.03□□□□□ -1.92
LDLRP01130 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.03□□□□□ -1.92
LDLRP01130 APOOP4-201ENST00000513530 597 ntBASIC3.03□□□□□ -1.92
LDLRP01130 AP005639.2-201ENST00000527592 928 ntBASIC3.03□□□□□ -1.92
LDLRP01130 AC022080.3-201ENST00000544433 482 ntBASIC3.03□□□□□ -1.92
LDLRP01130 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.03□□□□□ -1.92
LDLRP01130 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.03□□□□□ -1.92
LDLRP01130 AC078814.3-201ENST00000553036 491 ntBASIC3.03□□□□□ -1.92
LDLRP01130 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.03□□□□□ -1.92
LDLRP01130 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.03□□□□□ -1.92
LDLRP01130 AC011712.1-201ENST00000588959 234 ntBASIC3.03□□□□□ -1.92
LDLRP01130 AP001836.1-201ENST00000604675 523 ntBASIC3.03□□□□□ -1.92
LDLRP01130 AC009570.1-201ENST00000609599 745 ntBASIC3.03□□□□□ -1.92
LDLRP01130 MIR6715A-201ENST00000615929 79 ntBASIC3.03□□□□□ -1.92
LDLRP01130 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.03□□□□□ -1.92
LDLRP01130 AC024940.5-201ENST00000622889 474 ntBASIC3.03□□□□□ -1.92
LDLRP01130 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
LDLRP01130 CKAP2P1-201ENST00000555477 2049 ntBASIC3.03□□□□□ -1.92
LDLRP01130 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
LDLRP01130 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.02□□□□□ -1.93
LDLRP01130 FTLP6-201ENST00000355274 422 ntBASIC3.02□□□□□ -1.93
LDLRP01130 Y_RNA.326-201ENST00000365176 113 ntBASIC3.02□□□□□ -1.93
LDLRP01130 Y_RNA.367-201ENST00000365544 101 ntBASIC3.02□□□□□ -1.93
LDLRP01130 DYNLT3P1-201ENST00000378574 347 ntBASIC3.02□□□□□ -1.93
LDLRP01130 CD24P4-201ENST00000382840 243 ntBASIC3.02□□□□□ -1.93
LDLRP01130 Y_RNA.419-201ENST00000384041 102 ntBASIC3.02□□□□□ -1.93
LDLRP01130 RNU6-74P-201ENST00000384235 107 ntBASIC3.02□□□□□ -1.93
LDLRP01130 AL139397.2-201ENST00000404529 772 ntBASIC3.02□□□□□ -1.93
LDLRP01130 RNA5SP118-201ENST00000410385 109 ntBASIC3.02□□□□□ -1.93
LDLRP01130 RNA5SP38-201ENST00000410750 119 ntBASIC3.02□□□□□ -1.93
LDLRP01130 RNU6-1148P-201ENST00000410992 104 ntBASIC3.02□□□□□ -1.93
LDLRP01130 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.02□□□□□ -1.93
LDLRP01130 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.02□□□□□ -1.93
LDLRP01130 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.02□□□□□ -1.93
LDLRP01130 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.02□□□□□ -1.93
LDLRP01130 RPL36AP53-201ENST00000432891 316 ntBASIC3.02□□□□□ -1.93
LDLRP01130 MTCYBP6-201ENST00000441810 138 ntBASIC3.02□□□□□ -1.93
LDLRP01130 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.02□□□□□ -1.93
LDLRP01130 MTND1P18-201ENST00000448191 573 ntBASIC3.02□□□□□ -1.93
LDLRP01130 RPS26P21-201ENST00000475397 348 ntBASIC3.02□□□□□ -1.93
LDLRP01130 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.02□□□□□ -1.93
LDLRP01130 AC116562.3-201ENST00000506136 177 ntBASIC3.02□□□□□ -1.93
LDLRP01130 AC112206.3-201ENST00000514578 389 ntBASIC3.02□□□□□ -1.93
LDLRP01130 RNU6-927P-201ENST00000516199 100 ntBASIC3.02□□□□□ -1.93
LDLRP01130 RNA5SP471-201ENST00000516971 106 ntBASIC3.02□□□□□ -1.93
LDLRP01130 AC068587.5-201ENST00000528506 175 ntBASIC3.02□□□□□ -1.93
LDLRP01130 OR4R1P-201ENST00000529879 463 ntBASIC3.02□□□□□ -1.93
LDLRP01130 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.02□□□□□ -1.93
LDLRP01130 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.02□□□□□ -1.93
LDLRP01130 MIR4506-201ENST00000584693 77 ntBASIC3.02□□□□□ -1.93
LDLRP01130 AC013412.1-201ENST00000610687 192 ntBASIC3.02□□□□□ -1.93
LDLRP01130 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.02□□□□□ -1.93
LDLRP01130 AC090574.1-201ENST00000623186 233 ntBASIC3.02□□□□□ -1.93
LDLRP01130 AC009161.2-201ENST00000624626 138 ntBASIC3.02□□□□□ -1.93
LDLRP01130 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LDLRP01130 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
LDLRP01130 CUL1P1-201ENST00000509510 2425 ntBASIC3.02□□□□□ -1.93
LDLRP01130 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LDLRP01130 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
LDLRP01130 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.01□□□□□ -1.93
LDLRP01130 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.01□□□□□ -1.93
LDLRP01130 AC007785.2-201ENST00000598627 1916 ntBASIC3.01□□□□□ -1.93
LDLRP01130 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LDLRP01130 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.01□□□□□ -1.93
LDLRP01130 UBE2L2-201ENST00000254302 429 ntBASIC3.01□□□□□ -1.93
LDLRP01130 MIR449A-201ENST00000362113 91 ntBASIC3.01□□□□□ -1.93
LDLRP01130 Y_RNA.166-201ENST00000363730 102 ntBASIC3.01□□□□□ -1.93
LDLRP01130 RNU6-512P-201ENST00000364438 103 ntBASIC3.01□□□□□ -1.93
LDLRP01130 Y_RNA.460-201ENST00000384255 102 ntBASIC3.01□□□□□ -1.93
LDLRP01130 SNORA24.1-201ENST00000384401 135 ntBASIC3.01□□□□□ -1.93
LDLRP01130 AC092809.3-201ENST00000415453 231 ntBASIC3.01□□□□□ -1.93
LDLRP01130 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.01□□□□□ -1.93
LDLRP01130 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.01□□□□□ -1.93
LDLRP01130 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LDLRP01130 SEPT14P3-201ENST00000439401 183 ntBASIC3.01□□□□□ -1.93
LDLRP01130 BNIP3P2-201ENST00000441221 577 ntBASIC3.01□□□□□ -1.93
LDLRP01130 AC016691.1-201ENST00000441321 413 ntBASIC3.01□□□□□ -1.93
LDLRP01130 AL732372.2-207ENST00000445840 183 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms