Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 NDUFB4P7-201ENST00000423198 363 ntBASIC0.08□□□□□ -2.4
USH2AO75445 TOMM22P2-201ENST00000430735 237 ntBASIC0.08□□□□□ -2.4
USH2AO75445 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.08□□□□□ -2.4
USH2AO75445 AC079140.2-201ENST00000506193 142 ntBASIC0.08□□□□□ -2.4
USH2AO75445 AC108120.2-201ENST00000512973 294 ntBASIC0.08□□□□□ -2.4
USH2AO75445 SMARCE1P4-201ENST00000523647 241 ntBASIC0.08□□□□□ -2.4
USH2AO75445 SNRPGP15-201ENST00000600149 222 ntBASIC0.08□□□□□ -2.4
USH2AO75445 AC007363.1-201ENST00000604736 620 ntBASIC0.08□□□□□ -2.4
USH2AO75445 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
USH2AO75445 AC068647.2-201ENST00000637380 353 ntBASIC0.08□□□□□ -2.4
USH2AO75445 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.08□□□□□ -2.4
USH2AO75445 RN7SKP287-201ENST00000516546 266 ntBASIC0.08□□□□□ -2.4
USH2AO75445 SNORA31.13-201ENST00000516624 135 ntBASIC0.08□□□□□ -2.4
USH2AO75445 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.08□□□□□ -2.4
USH2AO75445 AC136618.2-201ENST00000575091 400 ntBASIC0.08□□□□□ -2.4
USH2AO75445 BNIP3P16-201ENST00000589779 534 ntBASIC0.08□□□□□ -2.4
USH2AO75445 AC017083.3-201ENST00000609955 700 ntBASIC0.08□□□□□ -2.4
USH2AO75445 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
USH2AO75445 PTGES3P4-201ENST00000426243 356 ntBASIC0.08□□□□□ -2.4
USH2AO75445 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.08□□□□□ -2.4
USH2AO75445 AC092001.1-201ENST00000453012 261 ntBASIC0.08□□□□□ -2.4
USH2AO75445 UBL5P1-201ENST00000507979 193 ntBASIC0.08□□□□□ -2.4
USH2AO75445 AC011406.1-201ENST00000512440 370 ntBASIC0.08□□□□□ -2.4
USH2AO75445 AC133963.2-201ENST00000513686 578 ntBASIC0.08□□□□□ -2.4
USH2AO75445 SCARNA16.5-201ENST00000517114 183 ntBASIC0.08□□□□□ -2.4
USH2AO75445 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.08□□□□□ -2.4
USH2AO75445 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.08□□□□□ -2.4
USH2AO75445 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.08□□□□□ -2.4
USH2AO75445 FAM60BP-201ENST00000578364 658 ntBASIC0.08□□□□□ -2.4
USH2AO75445 AC025594.3-201ENST00000613068 790 ntBASIC0.08□□□□□ -2.4
USH2AO75445 AC090132.2-201ENST00000615881 347 ntBASIC0.08□□□□□ -2.4
USH2AO75445 AL049641.1-201ENST00000441055 1948 ntBASIC0.07□□□□□ -2.4
USH2AO75445 OR2A41P-201ENST00000473586 105 ntBASIC0.07□□□□□ -2.4
USH2AO75445 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.07□□□□□ -2.4
USH2AO75445 AC109810.1-201ENST00000534066 224 ntBASIC0.07□□□□□ -2.4
USH2AO75445 AC019288.1-201ENST00000557918 224 ntBASIC0.07□□□□□ -2.4
USH2AO75445 BNIP3P31-201ENST00000604515 566 ntBASIC0.07□□□□□ -2.4
USH2AO75445 MIR496-201ENST00000385226 102 ntBASIC0.07□□□□□ -2.4
USH2AO75445 MIR100-201ENST00000385259 80 ntBASIC0.07□□□□□ -2.4
USH2AO75445 RPS3AP37-201ENST00000419176 745 ntBASIC0.07□□□□□ -2.4
USH2AO75445 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.07□□□□□ -2.4
USH2AO75445 SPINT5P-201ENST00000448174 155 ntBASIC0.07□□□□□ -2.4
USH2AO75445 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.07□□□□□ -2.4
USH2AO75445 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.07□□□□□ -2.4
USH2AO75445 RNU6-158P-201ENST00000517104 100 ntBASIC0.07□□□□□ -2.4
USH2AO75445 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.07□□□□□ -2.4
USH2AO75445 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.07□□□□□ -2.4
USH2AO75445 AP001328.1-201ENST00000528550 176 ntBASIC0.07□□□□□ -2.4
USH2AO75445 AC025165.5-201ENST00000602802 578 ntBASIC0.07□□□□□ -2.4
USH2AO75445 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
USH2AO75445 Y_RNA.180-201ENST00000363867 113 ntBASIC0.07□□□□□ -2.4
USH2AO75445 MIR30A-201ENST00000385092 71 ntBASIC0.07□□□□□ -2.4
USH2AO75445 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.07□□□□□ -2.4
USH2AO75445 RPS26P45-201ENST00000471748 340 ntBASIC0.07□□□□□ -2.4
USH2AO75445 OR5H4P-201ENST00000510851 923 ntBASIC0.07□□□□□ -2.4
USH2AO75445 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.07□□□□□ -2.4
USH2AO75445 Y_RNA.57-201ENST00000362806 113 ntBASIC0.07□□□□□ -2.4
USH2AO75445 RNU6-272P-201ENST00000411028 104 ntBASIC0.07□□□□□ -2.4
USH2AO75445 SEPT2P1-201ENST00000419651 180 ntBASIC0.07□□□□□ -2.4
USH2AO75445 AL512844.2-201ENST00000433990 593 ntBASIC0.07□□□□□ -2.4
USH2AO75445 HSPE1P22-201ENST00000456856 327 ntBASIC0.07□□□□□ -2.4
USH2AO75445 AC135999.1-201ENST00000478962 479 ntBASIC0.07□□□□□ -2.4
USH2AO75445 PSMC1P5-201ENST00000512850 177 ntBASIC0.07□□□□□ -2.4
USH2AO75445 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.07□□□□□ -2.4
USH2AO75445 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.07□□□□□ -2.4
USH2AO75445 AC018618.2-201ENST00000604770 446 ntBASIC0.07□□□□□ -2.4
USH2AO75445 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.07□□□□□ -2.4
USH2AO75445 MIR411-201ENST00000362239 96 ntBASIC0.06□□□□□ -2.4
USH2AO75445 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.06□□□□□ -2.4
USH2AO75445 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.06□□□□□ -2.4
USH2AO75445 AL669831.1-202ENST00000428504 417 ntBASIC0.06□□□□□ -2.4
USH2AO75445 GTF2IP13-201ENST00000438487 386 ntBASIC0.06□□□□□ -2.4
USH2AO75445 DYNLT3P2-201ENST00000442517 295 ntBASIC0.06□□□□□ -2.4
USH2AO75445 AC244505.3-201ENST00000454598 187 ntBASIC0.06□□□□□ -2.4
USH2AO75445 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.06□□□□□ -2.4
USH2AO75445 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.06□□□□□ -2.4
USH2AO75445 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.06□□□□□ -2.4
USH2AO75445 OR8K2P-201ENST00000524645 927 ntBASIC0.06□□□□□ -2.4
USH2AO75445 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.06□□□□□ -2.4
USH2AO75445 AC091489.2-201ENST00000566263 604 ntBASIC0.06□□□□□ -2.4
USH2AO75445 AC098614.4-201ENST00000607601 462 ntBASIC0.06□□□□□ -2.4
USH2AO75445 MIR6738-201ENST00000619620 64 ntBASIC0.06□□□□□ -2.4
USH2AO75445 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.06□□□□□ -2.4
USH2AO75445 SNORA32.1-201ENST00000364514 115 ntBASIC0.06□□□□□ -2.4
USH2AO75445 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.06□□□□□ -2.4
USH2AO75445 HMGN2P21-201ENST00000447764 270 ntBASIC0.06□□□□□ -2.4
USH2AO75445 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.06□□□□□ -2.4
USH2AO75445 ELOCP32-201ENST00000548625 324 ntBASIC0.06□□□□□ -2.4
USH2AO75445 RAC1P9-201ENST00000604990 392 ntBASIC0.06□□□□□ -2.4
USH2AO75445 AC009509.4-201ENST00000619202 509 ntBASIC0.06□□□□□ -2.4
USH2AO75445 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.06□□□□□ -2.4
USH2AO75445 ZNF519P1-201ENST00000449011 1626 ntBASIC0.06□□□□□ -2.4
USH2AO75445 USP9YP21-201ENST00000420603 432 ntBASIC0.06□□□□□ -2.4
USH2AO75445 MRPL35P3-201ENST00000421557 364 ntBASIC0.06□□□□□ -2.4
USH2AO75445 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.06□□□□□ -2.4
USH2AO75445 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.06□□□□□ -2.4
USH2AO75445 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.06□□□□□ -2.4
USH2AO75445 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.06□□□□□ -2.4
USH2AO75445 MIR4422-201ENST00000581938 83 ntBASIC0.06□□□□□ -2.4
USH2AO75445 RPL30P11-203ENST00000598995 310 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms