Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.92□□□□□ -2.1
NPHP4O75161 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.92□□□□□ -2.1
NPHP4O75161 AC092447.10-201ENST00000620607 1652 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 AL359851.1-201ENST00000569460 4997 ntBASIC1.92□□□□□ -2.1
NPHP4O75161 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NPHP4O75161 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NPHP4O75161 SNORA38-201ENST00000363946 132 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 Y_RNA.192-201ENST00000363977 102 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 MIR218-1-201ENST00000384999 110 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 RNU6-750P-201ENST00000390946 107 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AL139397.2-201ENST00000404529 772 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 MTND1P21-201ENST00000412991 285 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.91□□□□□ -2.1
NPHP4O75161 USP9YP13-201ENST00000417797 480 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.91□□□□□ -2.1
NPHP4O75161 MED14P1-201ENST00000430517 648 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 UBE2FP3-201ENST00000436366 524 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
NPHP4O75161 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.91□□□□□ -2.1
NPHP4O75161 AC010631.1-201ENST00000474150 156 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.91□□□□□ -2.1
NPHP4O75161 NDUFB4P2-201ENST00000509515 391 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 RNU5F-8P-201ENST00000515941 111 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.91□□□□□ -2.1
NPHP4O75161 AC010376.1-201ENST00000522101 334 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.91□□□□□ -2.1
NPHP4O75161 AL359212.1-201ENST00000556608 614 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.91□□□□□ -2.1
NPHP4O75161 AC023824.2-201ENST00000566185 400 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 MIR3122-201ENST00000577243 73 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC005261.5-201ENST00000596280 355 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC004987.4-201ENST00000603383 338 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AL133445.2-201ENST00000611191 527 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC005332.10-201ENST00000612725 619 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC099654.8-201ENST00000637757 681 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC009902.3-201ENST00000606235 2172 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC010889.1-201ENST00000566193 2666 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 Y_RNA.295-201ENST00000364918 102 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 RNU6-1032P-201ENST00000384100 107 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 MTCYBP38-201ENST00000417160 1123 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.91□□□□□ -2.1
NPHP4O75161 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.91□□□□□ -2.1
NPHP4O75161 MTCO1P53-201ENST00000441633 699 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 SNRPGP13-201ENST00000442212 177 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 MTCO3P45-201ENST00000443036 613 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 COX6CP12-201ENST00000446748 202 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.91□□□□□ -2.1
NPHP4O75161 AC007327.1-201ENST00000447461 264 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 RPS27P21-201ENST00000486977 252 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.91□□□□□ -2.1
NPHP4O75161 AC116353.3-201ENST00000511215 249 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AP000907.2-201ENST00000530827 353 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.91□□□□□ -2.1
NPHP4O75161 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
NPHP4O75161 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.91□□□□□ -2.1
NPHP4O75161 AC005730.3-201ENST00000583067 366 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC007229.1-201ENST00000590455 412 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 RPS15AP11-201ENST00000594193 385 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC016727.2-201ENST00000603988 621 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AL121652.1-201ENST00000608851 448 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC245297.2-201ENST00000610119 565 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 AC004808.1-201ENST00000627671 721 ntBASIC1.91□□□□□ -2.1
NPHP4O75161 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
NPHP4O75161 RNA5SP363-201ENST00000365072 115 ntBASIC1.9□□□□□ -2.11
NPHP4O75161 MIR524-201ENST00000385242 87 ntBASIC1.9□□□□□ -2.11
NPHP4O75161 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.9□□□□□ -2.11
NPHP4O75161 AC007560.1-201ENST00000426912 237 ntBASIC1.9□□□□□ -2.11
NPHP4O75161 RPL35AP22-201ENST00000436855 335 ntBASIC1.9□□□□□ -2.11
NPHP4O75161 MTND1P9-201ENST00000453775 944 ntBASIC1.9□□□□□ -2.11
NPHP4O75161 RPS29P29-201ENST00000456396 171 ntBASIC1.9□□□□□ -2.11
NPHP4O75161 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.9□□□□□ -2.11
NPHP4O75161 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.9□□□□□ -2.11
NPHP4O75161 AC023141.11-201ENST00000508864 202 ntBASIC1.9□□□□□ -2.11
NPHP4O75161 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.9□□□□□ -2.11
NPHP4O75161 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.9□□□□□ -2.11
NPHP4O75161 Y_RNA.675-201ENST00000516389 149 ntBASIC1.9□□□□□ -2.11
NPHP4O75161 SCARNA11.3-201ENST00000517276 130 ntBASIC1.9□□□□□ -2.11
NPHP4O75161 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.9□□□□□ -2.11
NPHP4O75161 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.9□□□□□ -2.11
NPHP4O75161 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.9□□□□□ -2.11
NPHP4O75161 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.9□□□□□ -2.11
NPHP4O75161 AC245884.12-201ENST00000615364 59 ntBASIC1.9□□□□□ -2.11
NPHP4O75161 AC007490.1-201ENST00000624321 703 ntBASIC1.9□□□□□ -2.11
NPHP4O75161 MTND4P27-201ENST00000450813 1354 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NPHP4O75161 Y_RNA.245-201ENST00000364493 95 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 MIR222-201ENST00000384992 110 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 AC119751.3-201ENST00000399720 670 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 RPL21P24-201ENST00000413752 448 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 MTND1P28-201ENST00000435623 950 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 SNRPEP7-201ENST00000438350 220 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 AP000542.1-201ENST00000448473 371 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 AC005410.1-202ENST00000460347 485 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.89□□□□□ -2.11
NPHP4O75161 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.89□□□□□ -2.11
NPHP4O75161 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.89□□□□□ -2.11
NPHP4O75161 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.89□□□□□ -2.11
NPHP4O75161 MTND5P13-201ENST00000513046 1079 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 RNA5SP165-201ENST00000517142 115 ntBASIC1.89□□□□□ -2.11
NPHP4O75161 AGGF1P5-201ENST00000567900 919 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms