Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-143P-201ENST00000516942 93 ntBASIC2.81□□□□□ -1.96
PRKNO60260 RNU6-1314P-201ENST00000517139 104 ntBASIC2.81□□□□□ -1.96
PRKNO60260 RPL7P20-201ENST00000520308 745 ntBASIC2.81□□□□□ -1.96
PRKNO60260 ATP5F1P5-201ENST00000526403 760 ntBASIC2.81□□□□□ -1.96
PRKNO60260 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PRKNO60260 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.81□□□□□ -1.96
PRKNO60260 AC011471.1-201ENST00000585766 187 ntBASIC2.81□□□□□ -1.96
PRKNO60260 AL451007.1-201ENST00000595491 289 ntBASIC2.81□□□□□ -1.96
PRKNO60260 DUSP12P1-201ENST00000612874 516 ntBASIC2.81□□□□□ -1.96
PRKNO60260 AC093913.1-201ENST00000614178 329 ntBASIC2.81□□□□□ -1.96
PRKNO60260 AP003400.5-201ENST00000624827 617 ntBASIC2.81□□□□□ -1.96
PRKNO60260 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.81□□□□□ -1.96
PRKNO60260 ZNF807-201ENST00000328088 1707 ntBASIC2.81□□□□□ -1.96
PRKNO60260 AC007785.2-201ENST00000598627 1916 ntBASIC2.81□□□□□ -1.96
PRKNO60260 AL365361.1-201ENST00000566942 3481 ntBASIC2.8□□□□□ -1.96
PRKNO60260 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.8□□□□□ -1.96
PRKNO60260 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PRKNO60260 AC110774.1-201ENST00000623567 2018 ntBASIC2.8□□□□□ -1.96
PRKNO60260 RNU6-522P-201ENST00000364497 107 ntBASIC2.8□□□□□ -1.96
PRKNO60260 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.8□□□□□ -1.96
PRKNO60260 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PRKNO60260 RNU6-393P-201ENST00000384475 107 ntBASIC2.8□□□□□ -1.96
PRKNO60260 SNORA16.2-201ENST00000390991 127 ntBASIC2.8□□□□□ -1.96
PRKNO60260 AC245291.1-201ENST00000419501 328 ntBASIC2.8□□□□□ -1.96
PRKNO60260 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.8□□□□□ -1.96
PRKNO60260 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.8□□□□□ -1.96
PRKNO60260 GPM6BP2-201ENST00000432046 144 ntBASIC2.8□□□□□ -1.96
PRKNO60260 AL591704.1-201ENST00000432574 275 ntBASIC2.8□□□□□ -1.96
PRKNO60260 RPS24P13-201ENST00000442520 397 ntBASIC2.8□□□□□ -1.96
PRKNO60260 SNRPEP8-201ENST00000442866 260 ntBASIC2.8□□□□□ -1.96
PRKNO60260 GPM6BP1-201ENST00000446387 144 ntBASIC2.8□□□□□ -1.96
PRKNO60260 RPL7P12-201ENST00000446719 750 ntBASIC2.8□□□□□ -1.96
PRKNO60260 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.8□□□□□ -1.96
PRKNO60260 RNU6-1208P-201ENST00000459588 107 ntBASIC2.8□□□□□ -1.96
PRKNO60260 RPL21P41-201ENST00000459863 264 ntBASIC2.8□□□□□ -1.96
PRKNO60260 AC007547.1-201ENST00000462177 490 ntBASIC2.8□□□□□ -1.96
PRKNO60260 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.8□□□□□ -1.96
PRKNO60260 AC083904.1-201ENST00000487828 231 ntBASIC2.8□□□□□ -1.96
PRKNO60260 AC009901.1-201ENST00000506703 541 ntBASIC2.8□□□□□ -1.96
PRKNO60260 MTND4LP22-201ENST00000508209 276 ntBASIC2.8□□□□□ -1.96
PRKNO60260 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.8□□□□□ -1.96
PRKNO60260 AC114781.4-201ENST00000513707 639 ntBASIC2.8□□□□□ -1.96
PRKNO60260 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.8□□□□□ -1.96
PRKNO60260 AC046134.1-201ENST00000514454 666 ntBASIC2.8□□□□□ -1.96
PRKNO60260 RNU6-875P-201ENST00000516488 106 ntBASIC2.8□□□□□ -1.96
PRKNO60260 RN7SKP272-201ENST00000516988 232 ntBASIC2.8□□□□□ -1.96
PRKNO60260 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.8□□□□□ -1.96
PRKNO60260 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.8□□□□□ -1.96
PRKNO60260 AC107953.1-201ENST00000522216 297 ntBASIC2.8□□□□□ -1.96
PRKNO60260 CASP1P1-201ENST00000526345 212 ntBASIC2.8□□□□□ -1.96
PRKNO60260 AC243972.3-201ENST00000539655 198 ntBASIC2.8□□□□□ -1.96
PRKNO60260 AC022080.3-201ENST00000544433 482 ntBASIC2.8□□□□□ -1.96
PRKNO60260 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.8□□□□□ -1.96
PRKNO60260 TRAV28-201ENST00000557548 323 ntBASIC2.8□□□□□ -1.96
PRKNO60260 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.8□□□□□ -1.96
PRKNO60260 UBE2V2P2-201ENST00000587677 504 ntBASIC2.8□□□□□ -1.96
PRKNO60260 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.8□□□□□ -1.96
PRKNO60260 AC092747.3-201ENST00000603769 301 ntBASIC2.8□□□□□ -1.96
PRKNO60260 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.8□□□□□ -1.96
PRKNO60260 AC009248.2-201ENST00000619826 254 ntBASIC2.8□□□□□ -1.96
PRKNO60260 AL079305.1-201ENST00000623159 3008 ntBASIC2.8□□□□□ -1.96
PRKNO60260 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PRKNO60260 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.8□□□□□ -1.96
PRKNO60260 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PRKNO60260 U3.6-201ENST00000363622 211 ntBASIC2.79□□□□□ -1.96
PRKNO60260 RNU6-767P-201ENST00000384132 107 ntBASIC2.79□□□□□ -1.96
PRKNO60260 RNA5SP219-201ENST00000390940 113 ntBASIC2.79□□□□□ -1.96
PRKNO60260 RPS4XP7-201ENST00000406274 780 ntBASIC2.79□□□□□ -1.96
PRKNO60260 AC096664.2-201ENST00000411843 406 ntBASIC2.79□□□□□ -1.96
PRKNO60260 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PRKNO60260 BX682237.1-201ENST00000415016 335 ntBASIC2.79□□□□□ -1.96
PRKNO60260 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.79□□□□□ -1.96
PRKNO60260 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.79□□□□□ -1.96
PRKNO60260 ARL5AP1-201ENST00000418991 388 ntBASIC2.79□□□□□ -1.96
PRKNO60260 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.79□□□□□ -1.96
PRKNO60260 RPS15AP6-201ENST00000420703 385 ntBASIC2.79□□□□□ -1.96
PRKNO60260 RPL31P12-201ENST00000422587 358 ntBASIC2.79□□□□□ -1.96
PRKNO60260 AC012498.1-201ENST00000424037 437 ntBASIC2.79□□□□□ -1.96
PRKNO60260 AL669831.1-202ENST00000428504 417 ntBASIC2.79□□□□□ -1.96
PRKNO60260 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.79□□□□□ -1.96
PRKNO60260 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.79□□□□□ -1.96
PRKNO60260 SNRPEP4-201ENST00000435815 279 ntBASIC2.79□□□□□ -1.96
PRKNO60260 GTF2IP13-201ENST00000438487 386 ntBASIC2.79□□□□□ -1.96
PRKNO60260 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.79□□□□□ -1.96
PRKNO60260 PRPS1P1-201ENST00000445305 876 ntBASIC2.79□□□□□ -1.96
PRKNO60260 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.79□□□□□ -1.96
PRKNO60260 CECR9-201ENST00000453421 199 ntBASIC2.79□□□□□ -1.96
PRKNO60260 AP000852.1-201ENST00000472460 573 ntBASIC2.79□□□□□ -1.96
PRKNO60260 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.79□□□□□ -1.96
PRKNO60260 RPS29P26-201ENST00000477483 171 ntBASIC2.79□□□□□ -1.96
PRKNO60260 RPL21P93-201ENST00000480465 489 ntBASIC2.79□□□□□ -1.96
PRKNO60260 AC092185.1-201ENST00000491371 97 ntBASIC2.79□□□□□ -1.96
PRKNO60260 Y_RNA.654-201ENST00000497848 106 ntBASIC2.79□□□□□ -1.96
PRKNO60260 TBCAP3-201ENST00000512475 312 ntBASIC2.79□□□□□ -1.96
PRKNO60260 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.79□□□□□ -1.96
PRKNO60260 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.79□□□□□ -1.96
PRKNO60260 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.79□□□□□ -1.96
PRKNO60260 AP002404.1-201ENST00000532005 451 ntBASIC2.79□□□□□ -1.96
PRKNO60260 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.79□□□□□ -1.96
PRKNO60260 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms