Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RNA5SP120-201ENST00000410900 112 ntBASIC3.73□□□□□ -1.81
PRPF3O43395 POLHP1-201ENST00000411806 470 ntBASIC3.73□□□□□ -1.81
PRPF3O43395 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.73□□□□□ -1.81
PRPF3O43395 MTATP6P23-201ENST00000440153 476 ntBASIC3.73□□□□□ -1.81
PRPF3O43395 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.73□□□□□ -1.81
PRPF3O43395 AC118273.2-201ENST00000532092 465 ntBASIC3.73□□□□□ -1.81
PRPF3O43395 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.73□□□□□ -1.81
PRPF3O43395 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.73□□□□□ -1.81
PRPF3O43395 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.73□□□□□ -1.81
PRPF3O43395 MIR5583-1-201ENST00000580941 59 ntBASIC3.73□□□□□ -1.81
PRPF3O43395 AC012119.1-201ENST00000603184 222 ntBASIC3.73□□□□□ -1.81
PRPF3O43395 SRGNP1-201ENST00000603392 451 ntBASIC3.73□□□□□ -1.81
PRPF3O43395 AL035413.2-201ENST00000604801 525 ntBASIC3.73□□□□□ -1.81
PRPF3O43395 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PRPF3O43395 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.73□□□□□ -1.81
PRPF3O43395 AL031601.2-202ENST00000622650 282 ntBASIC3.73□□□□□ -1.81
PRPF3O43395 AP003400.5-201ENST00000624827 617 ntBASIC3.73□□□□□ -1.81
PRPF3O43395 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.73□□□□□ -1.81
PRPF3O43395 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PRPF3O43395 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.72□□□□□ -1.81
PRPF3O43395 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF3O43395 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PRPF3O43395 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF3O43395 U3.12-201ENST00000364498 214 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 MIR34B-201ENST00000385076 84 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 RNU1-101P-201ENST00000391171 127 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 RNU6-876P-201ENST00000391295 104 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 EIF4E2P1-201ENST00000393781 255 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 BX682237.1-201ENST00000415016 335 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 RPLP0P7-201ENST00000416050 667 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 AL353705.1-201ENST00000433468 480 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 AL121601.2-201ENST00000438019 707 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 AC115115.1-201ENST00000449927 248 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 NIPA2P5-201ENST00000452282 464 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 BTF3P15-201ENST00000455606 336 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 AL031183.1-201ENST00000457667 207 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 RN7SL601P-201ENST00000471221 293 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.72□□□□□ -1.81
PRPF3O43395 MTCO3P9-201ENST00000506989 781 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 AC093331.1-201ENST00000521474 169 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.72□□□□□ -1.81
PRPF3O43395 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.72□□□□□ -1.81
PRPF3O43395 AC090115.3-201ENST00000553218 849 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.72□□□□□ -1.81
PRPF3O43395 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.72□□□□□ -1.81
PRPF3O43395 MIR548S-201ENST00000581352 82 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 MIR6134-201ENST00000617606 109 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 AC006504.8-201ENST00000621046 635 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 MIR3199-2-201ENST00000636243 86 ntBASIC3.72□□□□□ -1.81
PRPF3O43395 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PRPF3O43395 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF3O43395 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF3O43395 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF3O43395 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF3O43395 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF3O43395 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.71□□□□□ -1.81
PRPF3O43395 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRPF3O43395 Y_RNA.72-201ENST00000362894 103 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 Y_RNA.88-201ENST00000363029 99 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 SNORD14B-201ENST00000364533 90 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 Y_RNA.530-201ENST00000384587 101 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.71□□□□□ -1.82
PRPF3O43395 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.71□□□□□ -1.82
PRPF3O43395 AL365496.1-201ENST00000426885 215 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 CYCSP32-201ENST00000440548 321 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 HMGN2P10-201ENST00000448085 265 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 HMGN2P26-201ENST00000463169 339 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 RN7SL442P-201ENST00000473804 320 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.71□□□□□ -1.82
PRPF3O43395 MTCYBP18-201ENST00000501056 747 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.71□□□□□ -1.82
PRPF3O43395 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.71□□□□□ -1.82
PRPF3O43395 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRPF3O43395 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.71□□□□□ -1.82
PRPF3O43395 AC025281.1-201ENST00000567026 265 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.71□□□□□ -1.82
PRPF3O43395 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.71□□□□□ -1.82
PRPF3O43395 AC073539.2-201ENST00000597113 165 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 AC007179.3-201ENST00000604976 235 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 AC099778.2-201ENST00000610904 211 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 MIR7112-201ENST00000616126 65 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 ATP5A1P2-202ENST00000616464 443 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
PRPF3O43395 AC009033.1-201ENST00000624279 431 ntBASIC3.71□□□□□ -1.82
PRPF3O43395 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.71□□□□□ -1.82
PRPF3O43395 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.71□□□□□ -1.82
PRPF3O43395 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PRPF3O43395 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRPF3O43395 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PRPF3O43395 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRPF3O43395 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRPF3O43395 RNU6-805P-201ENST00000365643 106 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.7□□□□□ -1.82
PRPF3O43395 RPL21P40-201ENST00000428586 483 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.7□□□□□ -1.82
PRPF3O43395 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.7□□□□□ -1.82
PRPF3O43395 AL583843.1-201ENST00000456070 346 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 AC007547.1-201ENST00000462177 490 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.7□□□□□ -1.82
PRPF3O43395 AC018710.1-201ENST00000506509 158 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms