Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.73□□□□□ -1.97
CUX2O14529 AC116337.2-201ENST00000477662 156 ntBASIC2.73□□□□□ -1.97
CUX2O14529 AL135752.1-201ENST00000479477 471 ntBASIC2.73□□□□□ -1.97
CUX2O14529 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.73□□□□□ -1.97
CUX2O14529 OR5BM1P-201ENST00000512021 366 ntBASIC2.73□□□□□ -1.97
CUX2O14529 AC025755.1-201ENST00000521306 278 ntBASIC2.73□□□□□ -1.97
CUX2O14529 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.73□□□□□ -1.97
CUX2O14529 TRAV28-201ENST00000557548 323 ntBASIC2.73□□□□□ -1.97
CUX2O14529 MIR4999-201ENST00000585029 91 ntBASIC2.73□□□□□ -1.97
CUX2O14529 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.73□□□□□ -1.97
CUX2O14529 AL139418.1-201ENST00000613613 177 ntBASIC2.73□□□□□ -1.97
CUX2O14529 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CUX2O14529 AC068880.5-201ENST00000624331 290 ntBASIC2.73□□□□□ -1.97
CUX2O14529 AP000676.4-201ENST00000624659 623 ntBASIC2.73□□□□□ -1.97
CUX2O14529 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CUX2O14529 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.73□□□□□ -1.97
CUX2O14529 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CUX2O14529 MTND5P33-201ENST00000571250 1450 ntBASIC2.73□□□□□ -1.97
CUX2O14529 SNORA72.3-201ENST00000365074 132 ntBASIC2.72□□□□□ -1.97
CUX2O14529 AL008987.1-201ENST00000415528 237 ntBASIC2.72□□□□□ -1.97
CUX2O14529 HMGN2P30-201ENST00000423237 256 ntBASIC2.72□□□□□ -1.97
CUX2O14529 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.72□□□□□ -1.97
CUX2O14529 ANKRD26P4-201ENST00000455755 950 ntBASIC2.72□□□□□ -1.97
CUX2O14529 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.72□□□□□ -1.97
CUX2O14529 RPL31P41-201ENST00000477967 372 ntBASIC2.72□□□□□ -1.97
CUX2O14529 AL160314.1-201ENST00000490836 438 ntBASIC2.72□□□□□ -1.97
CUX2O14529 AC110760.3-202ENST00000515177 371 ntBASIC2.72□□□□□ -1.97
CUX2O14529 SNORA31.24-201ENST00000517232 57 ntBASIC2.72□□□□□ -1.97
CUX2O14529 MTND2P32-201ENST00000521584 1038 ntBASIC2.72□□□□□ -1.97
CUX2O14529 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.72□□□□□ -1.97
CUX2O14529 AP004247.1-201ENST00000531556 1289 ntBASIC2.72□□□□□ -1.97
CUX2O14529 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.72□□□□□ -1.97
CUX2O14529 AC090888.2-201ENST00000559765 1144 ntBASIC2.72□□□□□ -1.97
CUX2O14529 AC136618.2-201ENST00000575091 400 ntBASIC2.72□□□□□ -1.97
CUX2O14529 AC005951.2-201ENST00000576282 495 ntBASIC2.72□□□□□ -1.97
CUX2O14529 MIR544B-201ENST00000582372 78 ntBASIC2.72□□□□□ -1.97
CUX2O14529 AC007229.1-201ENST00000590455 412 ntBASIC2.72□□□□□ -1.97
CUX2O14529 U73023.1-201ENST00000603134 700 ntBASIC2.72□□□□□ -1.97
CUX2O14529 AC025588.2-201ENST00000604851 466 ntBASIC2.72□□□□□ -1.97
CUX2O14529 AC007038.2-201ENST00000608095 740 ntBASIC2.72□□□□□ -1.97
CUX2O14529 AC103710.4-201ENST00000609301 899 ntBASIC2.72□□□□□ -1.97
CUX2O14529 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.72□□□□□ -1.97
CUX2O14529 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.72□□□□□ -1.97
CUX2O14529 AC092125.1-201ENST00000562568 1995 ntBASIC2.72□□□□□ -1.97
CUX2O14529 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.97
CUX2O14529 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CUX2O14529 RNU6-741P-201ENST00000383889 107 ntBASIC2.71□□□□□ -1.97
CUX2O14529 RNU6-1105P-201ENST00000384774 107 ntBASIC2.71□□□□□ -1.97
CUX2O14529 AL109755.1-201ENST00000401791 649 ntBASIC2.71□□□□□ -1.97
CUX2O14529 RPL21P24-201ENST00000413752 448 ntBASIC2.71□□□□□ -1.97
CUX2O14529 MTND1P20-201ENST00000430341 950 ntBASIC2.71□□□□□ -1.97
CUX2O14529 RPS6P15-201ENST00000431996 751 ntBASIC2.71□□□□□ -1.97
CUX2O14529 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.71□□□□□ -1.97
CUX2O14529 RPS15AP7-201ENST00000439294 405 ntBASIC2.71□□□□□ -1.97
CUX2O14529 RNU7-59P-201ENST00000459101 61 ntBASIC2.71□□□□□ -1.97
CUX2O14529 AC138853.1-201ENST00000503549 823 ntBASIC2.71□□□□□ -1.97
CUX2O14529 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.71□□□□□ -1.97
CUX2O14529 AC023538.1-201ENST00000534576 736 ntBASIC2.71□□□□□ -1.97
CUX2O14529 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.71□□□□□ -1.97
CUX2O14529 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.71□□□□□ -1.97
CUX2O14529 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.71□□□□□ -1.97
CUX2O14529 AC004908.2-201ENST00000609090 574 ntBASIC2.71□□□□□ -1.97
CUX2O14529 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
CUX2O14529 AC091965.5-201ENST00000624785 342 ntBASIC2.71□□□□□ -1.97
CUX2O14529 PABPC1P9-201ENST00000426076 1612 ntBASIC2.71□□□□□ -1.98
CUX2O14529 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.71□□□□□ -1.98
CUX2O14529 AC013410.2-201ENST00000422627 201 ntBASIC2.71□□□□□ -1.98
CUX2O14529 AL365496.1-201ENST00000426885 215 ntBASIC2.71□□□□□ -1.98
CUX2O14529 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.71□□□□□ -1.98
CUX2O14529 Z82210.1-201ENST00000440037 231 ntBASIC2.71□□□□□ -1.98
CUX2O14529 BMI1P1-201ENST00000445879 941 ntBASIC2.71□□□□□ -1.98
CUX2O14529 TPT1P14-201ENST00000448018 505 ntBASIC2.71□□□□□ -1.98
CUX2O14529 RNU7-23P-201ENST00000459465 62 ntBASIC2.71□□□□□ -1.98
CUX2O14529 SNORD11.1-201ENST00000459482 85 ntBASIC2.71□□□□□ -1.98
CUX2O14529 AC010631.1-201ENST00000474150 156 ntBASIC2.71□□□□□ -1.98
CUX2O14529 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.71□□□□□ -1.98
CUX2O14529 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.71□□□□□ -1.98
CUX2O14529 AC009901.1-201ENST00000506703 541 ntBASIC2.71□□□□□ -1.98
CUX2O14529 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CUX2O14529 AC068587.4-201ENST00000533893 186 ntBASIC2.71□□□□□ -1.98
CUX2O14529 AC007115.1-201ENST00000546853 234 ntBASIC2.71□□□□□ -1.98
CUX2O14529 AC005498.1-201ENST00000592125 465 ntBASIC2.71□□□□□ -1.98
CUX2O14529 DUXAP4-201ENST00000603046 613 ntBASIC2.71□□□□□ -1.98
CUX2O14529 AC027449.1-201ENST00000608890 407 ntBASIC2.71□□□□□ -1.98
CUX2O14529 FTX_3.1-201ENST00000610451 147 ntBASIC2.71□□□□□ -1.98
CUX2O14529 AC092106.3-201ENST00000611308 722 ntBASIC2.71□□□□□ -1.98
CUX2O14529 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CUX2O14529 AC006026.1-201ENST00000444025 1803 ntBASIC2.71□□□□□ -1.98
CUX2O14529 RNU6-931P-201ENST00000363850 107 ntBASIC2.7□□□□□ -1.98
CUX2O14529 SNORA70.7-201ENST00000384159 133 ntBASIC2.7□□□□□ -1.98
CUX2O14529 RNU6-1200P-201ENST00000384162 107 ntBASIC2.7□□□□□ -1.98
CUX2O14529 RNY1P4-201ENST00000384595 115 ntBASIC2.7□□□□□ -1.98
CUX2O14529 CCNG1P1-201ENST00000406783 885 ntBASIC2.7□□□□□ -1.98
CUX2O14529 RNA5SP489-201ENST00000410986 109 ntBASIC2.7□□□□□ -1.98
CUX2O14529 AL451054.2-201ENST00000420896 202 ntBASIC2.7□□□□□ -1.98
CUX2O14529 AL445669.1-201ENST00000426743 755 ntBASIC2.7□□□□□ -1.98
CUX2O14529 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.7□□□□□ -1.98
CUX2O14529 AL354941.1-201ENST00000438600 464 ntBASIC2.7□□□□□ -1.98
CUX2O14529 MTCO3P45-201ENST00000443036 613 ntBASIC2.7□□□□□ -1.98
CUX2O14529 AL606517.1-201ENST00000446914 387 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms