Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC007938.3-201ENST00000604965 623 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 AC016727.1-205ENST00000605437 569 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 uc_338.1-201ENST00000612113 180 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 AC093913.1-201ENST00000614178 329 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 AL161629.2-201ENST00000615347 275 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 AC022418.1-201ENST00000624118 445 ntBASIC3.56□□□□□ -1.84
FOXN3O00409 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
FOXN3O00409 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
FOXN3O00409 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.56□□□□□ -1.84
FOXN3O00409 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
FOXN3O00409 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.56□□□□□ -1.84
FOXN3O00409 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
FOXN3O00409 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.55□□□□□ -1.84
FOXN3O00409 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.55□□□□□ -1.84
FOXN3O00409 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
FOXN3O00409 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.55□□□□□ -1.84
FOXN3O00409 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
FOXN3O00409 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
FOXN3O00409 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
FOXN3O00409 Y_RNA.58-201ENST00000362807 102 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 Y_RNA.154-201ENST00000363624 102 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 SNORA14A-201ENST00000364773 135 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 RNY3P1-201ENST00000365085 102 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 SNORD81.2-201ENST00000365153 76 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 RNY3-201ENST00000365484 102 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
FOXN3O00409 Y_RNA.490-201ENST00000384413 102 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 MIR10A-201ENST00000385043 110 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 RNA5SP171-201ENST00000391071 115 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 POLHP1-201ENST00000411806 470 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXN3O00409 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXN3O00409 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
FOXN3O00409 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.55□□□□□ -1.84
FOXN3O00409 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXN3O00409 AC006539.3-201ENST00000454258 129 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 AC092798.1-201ENST00000458542 409 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 HMGN2P26-201ENST00000463169 339 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 HMGB1P30-201ENST00000492455 606 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXN3O00409 RNU6-189P-201ENST00000516120 101 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 RPL7P20-201ENST00000520308 745 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 AC104027.1-201ENST00000521887 300 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.55□□□□□ -1.84
FOXN3O00409 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.55□□□□□ -1.84
FOXN3O00409 AC023050.3-201ENST00000541142 333 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.55□□□□□ -1.84
FOXN3O00409 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXN3O00409 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXN3O00409 VN1R80P-201ENST00000597126 338 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 AL355598.1-201ENST00000604169 202 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 AC002044.1-201ENST00000606707 158 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 AC004832.5-201ENST00000608677 401 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 AC135507.2-201ENST00000612443 309 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 AL136221.1-201ENST00000621449 509 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 AL031601.2-202ENST00000622650 282 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.55□□□□□ -1.84
FOXN3O00409 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.55□□□□□ -1.84
FOXN3O00409 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
FOXN3O00409 MAPK10-322ENST00000641485 4530 ntBASIC3.55□□□□□ -1.84
FOXN3O00409 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.54□□□□□ -1.84
FOXN3O00409 MIR412-201ENST00000362142 91 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 RNU6-845P-201ENST00000362578 103 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 Y_RNA.72-201ENST00000362894 103 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 MIR670-201ENST00000390142 98 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 RNU6-1148P-201ENST00000410992 104 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 AC009161.1-201ENST00000417306 376 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 ARL5AP1-201ENST00000418991 388 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 TOMM20P4-201ENST00000427861 435 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 AL353705.1-201ENST00000433468 480 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.54□□□□□ -1.84
FOXN3O00409 MRPL50P4-201ENST00000446432 475 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 snoU109.2-201ENST00000459316 135 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 RNU6-1208P-201ENST00000459588 107 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 Y_RNA.654-201ENST00000497848 106 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 HIGD1AP13-201ENST00000509878 289 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 RNU1-86P-201ENST00000516108 154 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 RNU1-107P-201ENST00000516617 154 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.54□□□□□ -1.84
FOXN3O00409 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXN3O00409 AC107953.1-201ENST00000522216 297 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXN3O00409 AC087045.1-201ENST00000605856 382 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
FOXN3O00409 AL138880.2-201ENST00000616214 239 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.54□□□□□ -1.84
FOXN3O00409 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.54□□□□□ -1.84
FOXN3O00409 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.54□□□□□ -1.84
FOXN3O00409 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
FOXN3O00409 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
FOXN3O00409 AC092435.3-201ENST00000565538 3654 ntBASIC3.54□□□□□ -1.84
FOXN3O00409 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.54□□□□□ -1.84
FOXN3O00409 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FOXN3O00409 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.53□□□□□ -1.84
FOXN3O00409 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
FOXN3O00409 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FOXN3O00409 RNU6-1252P-201ENST00000363054 104 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 RNU6-778P-201ENST00000363269 103 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 SNORA62.3-201ENST00000365110 153 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms