Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 RNU6-119P-201ENST00000364882 107 ntBASIC0.3□□□□□ -2.36
COL6A5A8TX70 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
COL6A5A8TX70 MIR100-201ENST00000385259 80 ntBASIC0.3□□□□□ -2.36
COL6A5A8TX70 RPL22P18-201ENST00000417197 377 ntBASIC0.3□□□□□ -2.36
COL6A5A8TX70 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.3□□□□□ -2.36
COL6A5A8TX70 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.3□□□□□ -2.36
COL6A5A8TX70 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.3□□□□□ -2.36
COL6A5A8TX70 RNA5SP165-201ENST00000517142 115 ntBASIC0.3□□□□□ -2.36
COL6A5A8TX70 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.3□□□□□ -2.36
COL6A5A8TX70 AC024405.2-202ENST00000532731 184 ntBASIC0.3□□□□□ -2.36
COL6A5A8TX70 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.3□□□□□ -2.36
COL6A5A8TX70 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.3□□□□□ -2.36
COL6A5A8TX70 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.3□□□□□ -2.36
COL6A5A8TX70 AC134026.1-201ENST00000623249 2239 ntBASIC0.3□□□□□ -2.36
COL6A5A8TX70 MIR214-201ENST00000385214 110 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 RPS3AP1-201ENST00000413190 320 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 EIF1P1-201ENST00000421436 341 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 AC013410.2-201ENST00000422627 201 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 RPL7P29-201ENST00000437151 728 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 MTND4P6-201ENST00000438297 472 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 AC092001.1-201ENST00000453012 261 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
COL6A5A8TX70 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.29□□□□□ -2.36
COL6A5A8TX70 RNY4-201ENST00000516507 96 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.29□□□□□ -2.36
COL6A5A8TX70 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.29□□□□□ -2.36
COL6A5A8TX70 AL355816.1-201ENST00000607951 118 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 UCA1.1-201ENST00000620952 75 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
COL6A5A8TX70 RNU1-105P-201ENST00000363470 161 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 SNORA68.1-201ENST00000364537 132 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 RNU4-9P-201ENST00000364951 139 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 RNU6-339P-201ENST00000384310 107 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 AC087588.1-201ENST00000462203 316 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 AC243960.4-201ENST00000600532 288 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 AC008121.1-201ENST00000603244 268 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 AC106900.2-201ENST00000604994 317 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 AC008759.3-201ENST00000613300 508 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 AC138627.2-201ENST00000624202 601 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 MIR4496-201ENST00000635896 61 ntBASIC0.29□□□□□ -2.36
COL6A5A8TX70 MIR587-201ENST00000384845 96 ntBASIC0.28□□□□□ -2.36
COL6A5A8TX70 CYCTP-201ENST00000504253 315 ntBASIC0.28□□□□□ -2.36
COL6A5A8TX70 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.28□□□□□ -2.36
COL6A5A8TX70 Y_RNA.711-201ENST00000516993 102 ntBASIC0.28□□□□□ -2.36
COL6A5A8TX70 AC074051.3-201ENST00000570238 358 ntBASIC0.28□□□□□ -2.36
COL6A5A8TX70 AC115085.1-201ENST00000588924 229 ntBASIC0.28□□□□□ -2.36
COL6A5A8TX70 BNIP3P31-201ENST00000604515 566 ntBASIC0.28□□□□□ -2.36
COL6A5A8TX70 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.28□□□□□ -2.36
COL6A5A8TX70 MTND5P17-201ENST00000418405 1603 ntBASIC0.28□□□□□ -2.36
COL6A5A8TX70 RNA5SP361-201ENST00000362686 118 ntBASIC0.28□□□□□ -2.37
COL6A5A8TX70 RNU6-654P-201ENST00000364373 107 ntBASIC0.28□□□□□ -2.37
COL6A5A8TX70 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.28□□□□□ -2.37
COL6A5A8TX70 EIF4EP4-201ENST00000424916 578 ntBASIC0.28□□□□□ -2.37
COL6A5A8TX70 UBE2V2P3-201ENST00000433562 437 ntBASIC0.28□□□□□ -2.37
COL6A5A8TX70 PRPS1P1-201ENST00000445305 876 ntBASIC0.28□□□□□ -2.37
COL6A5A8TX70 AL034418.1-201ENST00000448675 860 ntBASIC0.28□□□□□ -2.37
COL6A5A8TX70 AL590365.1-201ENST00000450788 243 ntBASIC0.28□□□□□ -2.37
COL6A5A8TX70 AC133963.2-201ENST00000513686 578 ntBASIC0.28□□□□□ -2.37
COL6A5A8TX70 AC018659.1-201ENST00000551083 169 ntBASIC0.28□□□□□ -2.37
COL6A5A8TX70 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
COL6A5A8TX70 MIR618-201ENST00000385287 98 ntBASIC0.27□□□□□ -2.37
COL6A5A8TX70 AL031577.2-201ENST00000404133 280 ntBASIC0.27□□□□□ -2.37
COL6A5A8TX70 CYP2C59P-201ENST00000457790 269 ntBASIC0.27□□□□□ -2.37
COL6A5A8TX70 AC067940.1-201ENST00000458411 300 ntBASIC0.27□□□□□ -2.37
COL6A5A8TX70 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.27□□□□□ -2.37
COL6A5A8TX70 AP003717.3-201ENST00000544832 1180 ntBASIC0.27□□□□□ -2.37
COL6A5A8TX70 AL157871.3-201ENST00000557231 293 ntBASIC0.27□□□□□ -2.37
COL6A5A8TX70 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.27□□□□□ -2.37
COL6A5A8TX70 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.27□□□□□ -2.37
COL6A5A8TX70 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
COL6A5A8TX70 MIR635-201ENST00000384830 98 ntBASIC0.27□□□□□ -2.37
COL6A5A8TX70 Y_RNA.616-201ENST00000410835 95 ntBASIC0.27□□□□□ -2.37
COL6A5A8TX70 RPL37P10-201ENST00000412884 288 ntBASIC0.27□□□□□ -2.37
COL6A5A8TX70 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.27□□□□□ -2.37
COL6A5A8TX70 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.27□□□□□ -2.37
COL6A5A8TX70 NDUFB4P10-201ENST00000452541 359 ntBASIC0.27□□□□□ -2.37
COL6A5A8TX70 RNU6-138P-201ENST00000515952 107 ntBASIC0.27□□□□□ -2.37
COL6A5A8TX70 GDI2P1-201ENST00000429312 1336 ntBASIC0.27□□□□□ -2.37
COL6A5A8TX70 MTND5P32-201ENST00000560711 1802 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.26□□□□□ -2.37
COL6A5A8TX70 EDDM3CP-201ENST00000415977 425 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 RPS3AP37-201ENST00000419176 745 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 AC079140.2-201ENST00000506193 142 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
COL6A5A8TX70 MRPS36P2-201ENST00000512569 299 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 SNORA44.1-201ENST00000517031 108 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 AP003049.1-201ENST00000529418 457 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 AC008945.2-201ENST00000606056 604 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 AL161629.2-201ENST00000615347 275 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 AL356585.4-201ENST00000623078 1229 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 MIR7515-201ENST00000637837 67 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 RNA5SP451-201ENST00000410588 110 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 USP9YP21-201ENST00000420603 432 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 AC097463.2-201ENST00000421074 142 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 SPINT5P-201ENST00000448174 155 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.26□□□□□ -2.37
COL6A5A8TX70 AC087477.1-201ENST00000465747 340 ntBASIC0.26□□□□□ -2.37
COL6A5A8TX70 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.26□□□□□ -2.37
COL6A5A8TX70 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.26□□□□□ -2.37
COL6A5A8TX70 RNU6-158P-201ENST00000517104 100 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms