Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 Y_RNA.639-201ENST00000458981 102 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 SNRPGP3-201ENST00000469405 227 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 HMGB3P16-201ENST00000508037 287 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 AC006445.2-201ENST00000510061 472 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 RNU6-1183P-201ENST00000517054 60 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 AC022080.3-201ENST00000544433 482 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 AC063950.1-201ENST00000552036 308 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 AL138880.2-201ENST00000616214 239 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 MTND4LP32-201ENST00000636111 270 ntBASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CCDC85CA6NKD9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 AC007823.1-201ENST00000569932 1566 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 NCAPGP1-201ENST00000505112 1814 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 SNORD42.2-201ENST00000365570 69 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 Z98749.2-208ENST00000381646 500 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 RNU6-43P-201ENST00000384302 107 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 RPL23AP48-201ENST00000406913 488 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 RNA5SP31-201ENST00000411144 127 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 AL158071.1-201ENST00000430315 461 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 HIGD1AP11-201ENST00000438361 280 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 RPL37P4-201ENST00000448908 268 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 AL513124.1-201ENST00000450410 614 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 AC013470.1-201ENST00000453438 462 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 HMGN2P7-201ENST00000456186 273 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 ELOCP24-201ENST00000456370 334 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 RNA5SP164-201ENST00000516533 110 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 AL442663.2-201ENST00000554385 511 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 MIR4782-201ENST00000577987 79 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 MIR4435-1-201ENST00000582552 80 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 HSPE1P7-201ENST00000604681 321 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 AC124303.1-201ENST00000605703 360 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 AC012531.5-201ENST00000611375 151 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 AL161423.1-201ENST00000613700 262 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 AC002076.2-201ENST00000617362 122 ntBASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCDC85CA6NKD9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 AL117339.3-201ENST00000418733 162 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 SNORD5.1-201ENST00000458800 75 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 TRBV12-1-201ENST00000479785 344 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 AC026782.1-201ENST00000512952 449 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 RNU1-54P-201ENST00000517181 120 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 AC109479.2-201ENST00000517842 174 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 AC093249.1-201ENST00000567049 203 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 MIR5690-201ENST00000583739 73 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 AC010201.1-201ENST00000605051 540 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 AC064836.2-201ENST00000609491 462 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 MIR7851-201ENST00000610611 160 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 SCARNA4-202ENST00000625402 129 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 IGHVIII-44-202ENST00000636235 289 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 AC010680.1-201ENST00000590024 3590 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC85CA6NKD9 GABRG2-229ENST00000641017 3628 ntBASIC4.21□□□□□ -1.73
CCDC85CA6NKD9 RNU4-35P-201ENST00000362588 141 ntBASIC4.21□□□□□ -1.74
CCDC85CA6NKD9 MIR518D-201ENST00000385014 87 ntBASIC4.21□□□□□ -1.74
CCDC85CA6NKD9 SNORD73A-201ENST00000386062 65 ntBASIC4.21□□□□□ -1.74
CCDC85CA6NKD9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC85CA6NKD9 MIR1271-201ENST00000408537 86 ntBASIC4.21□□□□□ -1.74
CCDC85CA6NKD9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms