| BACE2 | Q9Y5Z0 | SIRPG-AS1-201 | ENST00000437384 | 410 nt | TSL 3 BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AC083863.1-201 | ENST00000438811 | 231 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | PIGFP3-201 | ENST00000441918 | 722 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AL358232.1-201 | ENST00000448030 | 501 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | CHEK2P4-201 | ENST00000450340 | 246 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | RPS26P28-201 | ENST00000470806 | 348 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | RPL21P13-201 | ENST00000488305 | 481 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | VWA8P1-201 | ENST00000510889 | 176 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AC091887.1-201 | ENST00000514002 | 439 nt | TSL 5 BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | SNORA70.16-201 | ENST00000516390 | 95 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | RNU6-1271P-201 | ENST00000517049 | 105 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AC025755.1-201 | ENST00000521306 | 278 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AC131281.1-201 | ENST00000522984 | 164 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AL049775.2-201 | ENST00000557547 | 558 nt | TSL 4 BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AC008739.3-201 | ENST00000603262 | 127 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AL138825.1-201 | ENST00000618587 | 192 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | SERPINA7-201 | ENST00000327674 | 2642 nt | APPRIS P1 TSL 1 (best) BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | ARHGAP28-202 | ENST00000314319 | 5415 nt | APPRIS P2 TSL 5 BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | GDAP2-202 | ENST00000369443 | 8828 nt | APPRIS P1 TSL 2 BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | PREPL-205 | ENST00000409411 | 4725 nt | TSL 1 (best) BASIC | 4.17 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | STON1-GTF2A1L-202 | ENST00000394754 | 3824 nt | APPRIS P1 TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | RRAS2-202 | ENST00000414023 | 1884 nt | TSL 2 BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | SLAIN2-205 | ENST00000512093 | 4219 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | CD84-206 | ENST00000368054 | 8181 nt | APPRIS P3 TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | PLCB1-233 | ENST00000637919 | 5074 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | IFI16-208 | ENST00000448393 | 2245 nt | APPRIS ALT2 TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | RPL9P7-201 | ENST00000330965 | 580 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | RNU4-42P-201 | ENST00000364738 | 142 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | RNU6-827P-201 | ENST00000365553 | 106 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | MIR10A-201 | ENST00000385043 | 110 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | RNA5SP239-201 | ENST00000410218 | 129 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | RN7SKP177-201 | ENST00000410567 | 355 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AL109914.1-201 | ENST00000414740 | 146 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | NUP35P1-201 | ENST00000422734 | 947 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | GOT2P5-201 | ENST00000433995 | 546 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AL513043.1-201 | ENST00000439124 | 535 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AC069285.2-201 | ENST00000440210 | 275 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | CECR9-201 | ENST00000453421 | 199 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AP000873.1-201 | ENST00000463987 | 400 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | RPL9P9-202 | ENST00000466501 | 579 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AC133134.1-201 | ENST00000466800 | 359 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | KC877373.1-201 | ENST00000479066 | 408 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | MTND4LP22-201 | ENST00000508209 | 276 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AC017037.1-201 | ENST00000508460 | 471 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | SNORA31.8-201 | ENST00000516327 | 108 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.687-201 | ENST00000516558 | 91 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | RNA5SP291-201 | ENST00000517222 | 105 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | RNU6-794P-201 | ENST00000517261 | 64 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AC073655.2-202 | ENST00000547927 | 401 nt | TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | AC069029.1-201 | ENST00000558736 | 263 nt | TSL 2 BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | CYP4A43P-201 | ENST00000568156 | 121 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | ZNF562-205 | ENST00000587392 | 583 nt | TSL 2 BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | Z98751.3-201 | ENST00000604447 | 521 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | SNORA51-201 | ENST00000606420 | 132 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | ZSCAN26-204 | ENST00000614088 | 2321 nt | TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | ZC3H7A-202 | ENST00000396516 | 3845 nt | APPRIS P1 TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | OR5H14-202 | ENST00000641380 | 7323 nt | APPRIS P1 BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | TEX30-201 | ENST00000376019 | 1689 nt | TSL 2 BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | ABI3BP-206 | ENST00000471714 | 6783 nt | APPRIS ALT2 TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | CCDC30-212 | ENST00000507855 | 2445 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.15 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | ZFYVE16-201 | ENST00000338008 | 6773 nt | APPRIS P1 TSL 1 (best) BASIC | 4.15 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | CCDC146-201 | ENST00000285871 | 3333 nt | APPRIS P2 TSL 1 (best) BASIC | 4.15 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | ZNF72P-201 | ENST00000425869 | 1908 nt | BASIC | 4.15 | □□□□□ -1.74 | | |
| BACE2 | Q9Y5Z0 | DAZ4-206 | ENST00000449750 | 3271 nt | TSL 5 BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | SNORA71.3-201 | ENST00000362582 | 128 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.152-201 | ENST00000363578 | 100 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RNY3P11-201 | ENST00000364153 | 102 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | 5S_rRNA.1-201 | ENST00000364415 | 116 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RNA5SP189-201 | ENST00000364920 | 115 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | SNORA73.2-201 | ENST00000364946 | 201 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | SNORD14.1-201 | ENST00000365609 | 90 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.512-201 | ENST00000384518 | 102 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.533-201 | ENST00000384596 | 114 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.556-201 | ENST00000384677 | 113 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | U8.11-201 | ENST00000384699 | 133 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | U8.12-201 | ENST00000384701 | 133 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL591034.2-201 | ENST00000402839 | 359 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | PVALB-202 | ENST00000404171 | 422 nt | TSL 2 BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RPL23AP48-201 | ENST00000406913 | 488 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL590383.1-201 | ENST00000428602 | 75 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL627311.1-201 | ENST00000431514 | 115 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | U8.18-201 | ENST00000459285 | 133 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | PTP4A2-203 | ENST00000470404 | 575 nt | TSL 3 BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | LINC02146-201 | ENST00000504244 | 509 nt | TSL 3 BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC006499.6-201 | ENST00000511169 | 607 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RNU6-1073P-201 | ENST00000517182 | 106 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AP000889.1-201 | ENST00000530968 | 660 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | MYL12BP1-201 | ENST00000569826 | 507 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC087499.8-201 | ENST00000578406 | 226 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | MIR5188-201 | ENST00000583467 | 113 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL158827.2-201 | ENST00000602494 | 330 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC016727.2-201 | ENST00000603988 | 621 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL021879.1-201 | ENST00000611756 | 288 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | MIR7154-201 | ENST00000620673 | 73 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | TEX41-280 | ENST00000629185 | 591 nt | TSL 5 BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL691447.3-201 | ENST00000635020 | 330 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | KLHL13-208 | ENST00000541812 | 3102 nt | TSL 2 BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | ATP7A-201 | ENST00000341514 | 8483 nt | APPRIS P1 TSL 1 (best) BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | GABRB2-203 | ENST00000393959 | 7191 nt | TSL 1 (best) BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AKT3-201 | ENST00000263826 | 7081 nt | APPRIS P1 TSL 1 (best) BASIC | 4.15 | □□□□□ -1.75 | | |