Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC087884.1-201ENST00000469738 328 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 AC026801.1-201ENST00000497178 464 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 MIR2114-201ENST00000516645 80 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 AC025755.1-201ENST00000521306 278 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 COPS8P3-201ENST00000526024 482 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 AP005639.2-201ENST00000527592 928 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 AC026371.1-201ENST00000551867 419 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 AC020661.2-201ENST00000560114 134 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 MIR5195-201ENST00000583555 115 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 FTX_3.1-201ENST00000610451 147 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 ATP5A1P2-202ENST00000616464 443 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 FAM35DP-201ENST00000323387 2712 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 ZNF519P1-201ENST00000449011 1626 ntBASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHB1Q9Y5F3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 MIR218-2-201ENST00000385006 110 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 Y_RNA.579-201ENST00000390939 94 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 SNORA75.4-201ENST00000391278 119 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 MIR548F5-201ENST00000408421 86 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 RN7SKP158-201ENST00000410453 326 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 Z92545.1-201ENST00000411782 234 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 CYCSP33-201ENST00000414485 327 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 AL627311.1-201ENST00000431514 115 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 MTND1P17-201ENST00000448961 204 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 CYCSP35-201ENST00000451978 304 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 CEACAMP4-201ENST00000457676 421 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 AC011005.2-201ENST00000487324 359 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 AC096576.1-201ENST00000489014 359 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 RPS27P27-201ENST00000498779 255 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 MTND5P5-201ENST00000503764 376 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 RN7SKP24-201ENST00000515888 284 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 RN7SKP18-201ENST00000516005 275 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 RNU6-1332P-201ENST00000516666 104 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 AC009902.1-201ENST00000519351 183 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 HMGB1P14-201ENST00000557424 591 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 MIR5187-201ENST00000583479 76 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 AC011471.1-201ENST00000585766 187 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 POLR3GP2-201ENST00000588366 668 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 NUTF2P8-201ENST00000604593 363 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 AC110741.2-201ENST00000605278 268 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 AL627309.6-201ENST00000606857 840 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 AL359757.2-201ENST00000624309 274 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 MTND4LP32-201ENST00000636111 270 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 ZNF807-201ENST00000328088 1707 ntBASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDHB1Q9Y5F3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 Y_RNA.259-201ENST00000364619 101 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 RNA5SP51-201ENST00000364750 119 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 SNORD6-201ENST00000365444 73 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 RNU6-1297P-201ENST00000384415 104 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 SNORA1.3-201ENST00000384676 136 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 SNORA40C-201ENST00000391285 128 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 Y_RNA.623-201ENST00000411128 95 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 RPS15AP6-201ENST00000420703 385 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 MTCO2P27-201ENST00000420740 428 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 TOMM20P4-201ENST00000427861 435 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AL158071.1-201ENST00000430315 461 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 FABP5P14-201ENST00000437273 393 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 NIPA2P5-201ENST00000452282 464 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 SNORD19B-201ENST00000459623 84 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AL135752.1-201ENST00000479477 471 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AC139453.3-201ENST00000493276 369 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 RNU1-86P-201ENST00000516108 154 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 RNU1-107P-201ENST00000516617 154 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AL442663.2-201ENST00000554385 511 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 FRG2DP-202ENST00000566967 323 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AC093249.1-201ENST00000567049 203 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 OR1M4P-201ENST00000589199 287 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms