Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNU6-890P-201ENST00000384121 107 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 SNORA75.6-201ENST00000391318 127 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 PTMAP2-201ENST00000397627 327 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 RNU6ATAC-201ENST00000408749 126 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 HMGN2P30-201ENST00000423237 256 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.52□□□□□ -1.69
DDX41Q9UJV9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.52□□□□□ -1.69
DDX41Q9UJV9 AL500522.2-201ENST00000448562 343 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 RPL37P4-201ENST00000448908 268 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 NIPA2P5-201ENST00000452282 464 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 RPL12P25-201ENST00000455592 494 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 HMGN2P16-201ENST00000456802 261 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 MIR2053-201ENST00000459295 91 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 ACA59.1-201ENST00000515966 143 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 RNU6-327P-201ENST00000516270 127 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
DDX41Q9UJV9 AC022634.1-201ENST00000520765 532 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.52□□□□□ -1.69
DDX41Q9UJV9 AC244505.7-201ENST00000599675 272 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.52□□□□□ -1.69
DDX41Q9UJV9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
DDX41Q9UJV9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.52□□□□□ -1.69
DDX41Q9UJV9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
DDX41Q9UJV9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
DDX41Q9UJV9 AC007823.1-201ENST00000569932 1566 ntBASIC4.52□□□□□ -1.69
DDX41Q9UJV9 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 Y_RNA.112-201ENST00000363250 102 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 Y_RNA.404-201ENST00000383978 102 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 MIR606-201ENST00000384851 96 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 SNORD56-201ENST00000413522 71 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 SYF2P2-201ENST00000417620 583 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 AC087650.1-201ENST00000431445 468 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 NOTCH2P1-201ENST00000443481 624 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 MTATP6P7-201ENST00000453315 681 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 AL135752.1-201ENST00000479477 471 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 RNU6-264P-201ENST00000517134 104 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 RNA5SP179-201ENST00000517284 121 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 YPEL5P3-201ENST00000547227 352 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 AL360085.1-201ENST00000604713 532 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 AC016925.2-201ENST00000605108 242 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 AC018889.1-201ENST00000605372 397 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 AC040896.1-201ENST00000613819 479 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 AL391261.4-201ENST00000616012 481 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 PLCE1P1-201ENST00000622094 305 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 AC012442.3-202ENST00000636742 206 ntBASIC4.51□□□□□ -1.69
DDX41Q9UJV9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
DDX41Q9UJV9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 SNORA33.2-201ENST00000365413 134 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 Y_RNA.473-201ENST00000384333 102 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 AC006946.1-201ENST00000429106 328 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 AL137792.2-201ENST00000443484 235 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 HMGB3P8-201ENST00000449709 577 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 AC006026.2-201ENST00000457376 180 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 snoU13.22-201ENST00000459428 104 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 U8.21-201ENST00000459536 136 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 RPL23AP45-201ENST00000476406 468 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 RNU6-1231P-201ENST00000517185 103 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 IGKV2-38-201ENST00000517443 247 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 AC023442.1-201ENST00000531247 422 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 AC091167.4-201ENST00000605079 184 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 AL121917.1-203ENST00000605534 577 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 AC004852.3-201ENST00000614131 326 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 MIR6075-201ENST00000620782 95 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 FP236240.3-201ENST00000623061 327 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 CR392039.5-201ENST00000623201 510 ntBASIC4.5□□□□□ -1.69
DDX41Q9UJV9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DDX41Q9UJV9 Y_RNA.28-201ENST00000362554 111 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms