Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 AC073073.2-201ENST00000609827 2578 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 AC092268.1-201ENST00000342691 405 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 RNA5SP361-201ENST00000362686 118 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 Y_RNA.230-201ENST00000364348 109 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 RNU6-746P-201ENST00000384112 109 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 RNU6-281P-201ENST00000384212 103 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 RNU6-662P-201ENST00000384253 104 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 RNU6-21P-201ENST00000384710 107 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 RNU6-159P-201ENST00000391080 106 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 FTH1P15-201ENST00000406984 280 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 HSPE1P12-201ENST00000412576 301 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 AC078809.1-201ENST00000427601 140 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 AC000111.2-201ENST00000448200 210 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 RPL7P49-201ENST00000471402 708 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 S100A11P1-201ENST00000477525 312 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 AC008897.1-201ENST00000494006 347 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 RPS27AP10-201ENST00000496103 208 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 SNORA25.14-201ENST00000516481 132 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 RNA5SP392-201ENST00000516905 112 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 AC011602.1-201ENST00000546484 331 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 HSPE1P4-201ENST00000550617 308 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 AL451007.1-201ENST00000595491 289 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 Z83818.1-201ENST00000603584 150 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 BRDTP1-201ENST00000605735 677 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 AP000346.3-201ENST00000622821 210 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 MIR3529-201ENST00000637713 78 ntBASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXD3Q9UJU5 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 AC068254.2-201ENST00000623938 3577 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 RNU6-1159P-201ENST00000362933 107 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 RNU5F-3P-201ENST00000363767 117 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 RNU1-32P-201ENST00000363937 159 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 RNU6-1280P-201ENST00000365211 107 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 PCNPP3-201ENST00000393579 471 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 AL357515.1-201ENST00000402967 542 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 AL358075.3-201ENST00000426289 226 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 AC010326.1-201ENST00000462726 602 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 RPL26P26-201ENST00000480251 434 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 Y_RNA.719-201ENST00000517156 106 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 AC005868.1-201ENST00000536421 331 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 AC021231.3-201ENST00000558497 370 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 AC009163.5-201ENST00000575421 637 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 MIR4697-201ENST00000582977 78 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 AL162424.1-201ENST00000602325 221 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 AL133412.1-201ENST00000380194 2992 ntBASIC4.35□□□□□ -1.71
FOXD3Q9UJU5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 Z95331.1-201ENST00000623075 23112 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 AP000542.2-201ENST00000623199 6179 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 RNU6-858P-201ENST00000362436 107 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 RNU6-545P-201ENST00000362681 104 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 Y_RNA.569-201ENST00000384749 103 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 MIR544A-201ENST00000384855 91 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 MTCO1P5-201ENST00000433573 344 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 TPT1P12-201ENST00000448968 492 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 NDUFS5P3-201ENST00000450668 321 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 RPS5P7-201ENST00000456664 608 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 RPL26P9-201ENST00000457466 433 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 AC117440.1-201ENST00000474107 571 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 RPS4XP22-201ENST00000480755 780 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms