Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 HMGN2P23-201ENST00000456759 269 ntBASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 AC139453.3-201ENST00000493276 369 ntBASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 SNORA44.1-201ENST00000517031 108 ntBASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 RNU6-1183P-201ENST00000517054 60 ntBASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 CYCSP27-201ENST00000527643 293 ntBASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 IMMP1LP2-201ENST00000552954 492 ntBASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 AC021646.1-201ENST00000605469 484 ntBASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VPS29Q9UBQ0 ZNF72P-201ENST00000425869 1908 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 MIR424-201ENST00000362227 98 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 RNU1-17P-201ENST00000363022 152 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 RNU6-354P-201ENST00000383862 107 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 RNU6-203P-201ENST00000384038 104 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 RNU6-1032P-201ENST00000384100 107 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 RNU6-610P-201ENST00000384264 107 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 AL133475.1-201ENST00000404414 305 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 UBE2V1P4-201ENST00000425374 344 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 HMGB1P27-201ENST00000431429 603 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 AL591806.2-201ENST00000433122 173 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 FCF1P6-201ENST00000456841 595 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 AC116655.1-201ENST00000508324 901 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 AC093809.1-201ENST00000509155 340 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 RNU6-678P-201ENST00000516832 109 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 AC023825.1-201ENST00000566704 1030 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 AC021171.1-201ENST00000603137 706 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 AL445435.1-201ENST00000604232 665 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 AC034229.4-201ENST00000607861 441 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 AL359314.1-201ENST00000616913 261 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 AC099842.1-201ENST00000619919 596 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.3□□□□□ -2.2
VPS29Q9UBQ0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 RNU6-512P-201ENST00000364438 103 ntBASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 RNU6-1280P-201ENST00000365211 107 ntBASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 MIR30A-201ENST00000385092 71 ntBASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 FO393414.1-201ENST00000428697 1184 ntBASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 RNU6-362P-201ENST00000516736 90 ntBASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 AC023813.2-201ENST00000564321 469 ntBASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 MIR5708-201ENST00000579723 85 ntBASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 MIR4303-201ENST00000581299 66 ntBASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 MIR6134-201ENST00000617606 109 ntBASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 AC091304.6-201ENST00000619761 202 ntBASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 U6.99-201ENST00000637524 83 ntBASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 ZNF209P-201ENST00000593450 2304 ntBASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 WWP1P1-201ENST00000466609 2769 ntBASIC1.29□□□□□ -2.2
VPS29Q9UBQ0 RNU6-207P-201ENST00000384137 107 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 OR51A5P-201ENST00000415429 942 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 AC074117.2-201ENST00000417130 397 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 TOMM20P4-201ENST00000427861 435 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 AC092634.2-201ENST00000428146 1010 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 AC010631.1-201ENST00000474150 156 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 MTCYBP35-201ENST00000503630 1137 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 TPT1P8-201ENST00000510120 555 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 MTCO3P15-201ENST00000526563 574 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 SNRPGP1-201ENST00000553864 222 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 AL161670.1-201ENST00000554348 137 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 AL731537.2-201ENST00000561565 951 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 U1.36-201ENST00000620684 176 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.28□□□□□ -2.2
VPS29Q9UBQ0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 RNU6-468P-201ENST00000384003 109 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms