Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 MIR597-201ENST00000384968 97 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 MIR506-201ENST00000384998 124 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 RPL37P10-201ENST00000412884 288 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 AL590623.1-201ENST00000427864 105 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 MTND1P28-201ENST00000435623 950 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 MTND5P8-201ENST00000449817 1083 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 AC013267.1-201ENST00000458227 267 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 snoU13.9-201ENST00000458927 103 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 AC091860.1-201ENST00000505723 432 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 AC125611.1-201ENST00000549563 229 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 MIR4666A-201ENST00000580160 79 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 CYP2C61P-201ENST00000604072 290 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 NDUFA8P1-201ENST00000605525 367 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 uc_338.12-201ENST00000616344 181 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 AC090517.3-201ENST00000625170 141 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 MTND5P9-201ENST00000503854 1755 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 Y_RNA.245-201ENST00000364493 95 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 RNU1-39P-201ENST00000383897 165 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 U8.10-201ENST00000384260 133 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 RNA5SP100-201ENST00000410903 110 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 RNA5SP59-201ENST00000410922 110 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 VN1R42P-201ENST00000424651 344 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AL591806.2-201ENST00000433122 173 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 CR769776.1-201ENST00000441254 787 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 BX322784.1-201ENST00000455793 1077 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AL121594.1-201ENST00000475906 575 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AC010460.2-201ENST00000509054 677 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AC025465.3-201ENST00000510570 311 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AP005660.1-201ENST00000522972 293 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AP000889.1-201ENST00000530968 660 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 MRPS36P5-201ENST00000551909 298 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AC138627.2-201ENST00000624202 601 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 AP003485.1-201ENST00000625093 753 ntBASIC0.84□□□□□ -2.27
COMMD3Q9UBI1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 RNU4-38P-201ENST00000364472 129 ntBASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 SNORA25.8-201ENST00000364831 128 ntBASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 MIR1262-201ENST00000408276 93 ntBASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 AC234064.1-201ENST00000436312 247 ntBASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 MTCO1P44-201ENST00000441935 243 ntBASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 RPL21P47-201ENST00000483696 477 ntBASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 RNU6-703P-201ENST00000516946 107 ntBASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 COPS8P3-201ENST00000526024 482 ntBASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 AL391813.2-201ENST00000609113 322 ntBASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 TEX21P-201ENST00000447107 1476 ntBASIC0.83□□□□□ -2.28
COMMD3Q9UBI1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 SNORA7.1-201ENST00000363750 139 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 SNORD14D-201ENST00000384390 87 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 Y_RNA.548-201ENST00000384656 105 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 SNORA48.1-201ENST00000390879 135 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 RNU2-48P-201ENST00000410694 191 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 RNU2-68P-201ENST00000410878 191 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 RN7SKP284-201ENST00000411002 343 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 RNU6-575P-201ENST00000411326 105 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 TOMM20P4-201ENST00000427861 435 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 MTCYBP11-201ENST00000447254 1109 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 OFD1P3Y-201ENST00000453312 783 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 CECR9-201ENST00000453421 199 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 AC112771.1-201ENST00000463581 102 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 RPL30P7-201ENST00000479312 323 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 ADAM3B-201ENST00000569937 840 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 AC090615.1-201ENST00000577519 154 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms