Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 CASC19-280ENST00000642102 1351 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 RNU6-1303P-201ENST00000364841 107 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 RNU6-166P-201ENST00000384371 107 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 RNU6-658P-201ENST00000384606 106 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 MIR490-201ENST00000384865 128 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 RNU4-26P-201ENST00000410270 107 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 Y_RNA.623-201ENST00000411128 95 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 RNU6-607P-201ENST00000411283 108 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 POLHP1-201ENST00000411806 470 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 NDUFS5P4-201ENST00000412983 318 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 AL592148.1-201ENST00000413568 445 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 AC097713.2-201ENST00000430199 356 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 AC005019.1-201ENST00000436455 431 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 AL078601.1-201ENST00000444542 271 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 AC092798.1-201ENST00000458542 409 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 RNU7-167P-201ENST00000459160 62 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 DYNLL1P5-201ENST00000467158 270 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 HMGB1P30-201ENST00000492455 606 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 AC074344.1-201ENST00000512823 224 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 RNU1-86P-201ENST00000516108 154 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 RNU1-107P-201ENST00000516617 154 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 LRRC37A5P-203ENST00000580181 585 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 AC092747.3-201ENST00000603769 301 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 AC099654.14-201ENST00000638599 341 ntBASIC2.93□□□□□ -1.94
HINT3Q9NQE9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.93□□□□□ -1.94
HINT3Q9NQE9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AC233263.6-201ENST00000631132 1963 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 Y_RNA.86-201ENST00000363020 111 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 Y_RNA.167-201ENST00000363735 109 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 SNORD46.1-201ENST00000364139 104 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 RNU1-33P-201ENST00000364249 162 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 SNORD14B-201ENST00000364533 90 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 SNORA14A-201ENST00000364773 135 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 RNA5SP219-201ENST00000390940 113 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 CYCSP33-201ENST00000414485 327 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 CYCSP32-201ENST00000440548 321 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 NDUFB1P2-201ENST00000449477 176 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AL590639.1-201ENST00000456484 337 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AC074250.1-201ENST00000511117 192 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AC010265.1-201ENST00000513509 211 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 RNU6-189P-201ENST00000516120 101 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 Y_RNA.665-201ENST00000516177 98 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 RNU6-1183P-201ENST00000517054 60 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AC090115.3-201ENST00000553218 849 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 MIR4782-201ENST00000577987 79 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 HMGN2P15-201ENST00000585707 270 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 BNIP3P22-201ENST00000593399 556 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 VN1R80P-201ENST00000597126 338 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 RMST_4.1-201ENST00000616886 107 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AC103705.1-201ENST00000619013 241 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AL031601.2-202ENST00000622650 282 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 DUXAP9-208ENST00000622815 614 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 AC100810.6-201ENST00000638068 285 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HINT3Q9NQE9 GABRG2-229ENST00000641017 3628 ntBASIC2.92□□□□□ -1.94
HINT3Q9NQE9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HINT3Q9NQE9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HINT3Q9NQE9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HINT3Q9NQE9 RNU6-384P-201ENST00000364900 104 ntBASIC2.91□□□□□ -1.94
HINT3Q9NQE9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HINT3Q9NQE9 RNU6-876P-201ENST00000391295 104 ntBASIC2.91□□□□□ -1.94
HINT3Q9NQE9 RPL21P3-201ENST00000395517 478 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms