Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 XKRYP2-201ENST00000432915 492 ntBASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 GDI2P2-201ENST00000445131 608 ntBASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 MTCO1P42-201ENST00000457379 726 ntBASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 RPL36AP48-201ENST00000485521 314 ntBASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 MTCYBP35-201ENST00000503630 1137 ntBASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 MIR514B-201ENST00000516774 80 ntBASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AP000907.2-201ENST00000530827 353 ntBASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AC023050.2-201ENST00000544968 387 ntBASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 MTATP6P24-201ENST00000576835 677 ntBASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AC108747.1-201ENST00000609508 535 ntBASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AL356266.1-201ENST00000623311 483 ntBASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AC017037.3-201ENST00000625016 472 ntBASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
TM9SF3Q9HD45 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 MIRLET7G-201ENST00000362280 84 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 Y_RNA.18-201ENST00000362461 102 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 Y_RNA.97-201ENST00000363094 102 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 U8.14-201ENST00000390843 143 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AL591416.1-201ENST00000404015 867 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AL139397.2-201ENST00000404529 772 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AC098592.1-201ENST00000419352 333 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 WARS2P1-201ENST00000429678 537 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 UBE2FP3-201ENST00000436366 524 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AC055731.1-201ENST00000474387 401 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AC079804.2-201ENST00000490376 200 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 RNU6-143P-201ENST00000516942 93 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 SNORA31.25-201ENST00000517242 134 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 HSPE1P18-201ENST00000517602 280 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 MIR4307-201ENST00000582802 84 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AC073544.2-201ENST00000601155 540 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 AP000811.1-201ENST00000603803 651 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 SDR42E1P4-201ENST00000620894 481 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 U6.99-201ENST00000637524 83 ntBASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
TM9SF3Q9HD45 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 SNORA16B-201ENST00000364674 135 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 MIR1305-201ENST00000408300 86 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 SNORA11.4-201ENST00000408823 129 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AC010099.3-201ENST00000423896 409 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AC009238.1-201ENST00000442165 424 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AC009237.6-201ENST00000446969 424 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AC107032.1-201ENST00000485945 480 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AC116347.2-201ENST00000514912 523 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 RNU6-64P-201ENST00000517119 105 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 RNU2-19P-201ENST00000517288 84 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AP003461.1-201ENST00000528866 78 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AC090888.2-201ENST00000559765 1144 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AC012435.1-202ENST00000568772 240 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AC022022.2-201ENST00000602989 360 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AC087683.2-201ENST00000611384 326 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 AC009159.2-201ENST00000617603 606 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 MIR6766-201ENST00000622641 72 ntBASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
TM9SF3Q9HD45 CKAP2P1-201ENST00000555477 2049 ntBASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TM9SF3Q9HD45 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms