Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC002486.1-201ENST00000435098 391 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 MRPS17P3-201ENST00000465453 385 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 AC104472.2-201ENST00000469035 601 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 AC128713.1-201ENST00000471495 306 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 TRBV1-201ENST00000476502 284 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 AC006483.1-201ENST00000487308 313 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.24□□□□□ -1.89
USP44Q9H0E7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.24□□□□□ -1.89
USP44Q9H0E7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.24□□□□□ -1.89
USP44Q9H0E7 AC114786.4-201ENST00000508771 728 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 RNU6-703P-201ENST00000516946 107 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 RNU6-685P-201ENST00000517088 95 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.24□□□□□ -1.89
USP44Q9H0E7 AP003122.3-201ENST00000526316 255 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 AC084851.1-201ENST00000529105 249 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 AL391646.1-201ENST00000603860 190 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 AL121992.2-201ENST00000606262 256 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.24□□□□□ -1.89
USP44Q9H0E7 AL158209.2-201ENST00000619266 216 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.24□□□□□ -1.89
USP44Q9H0E7 AC124864.2-201ENST00000624736 186 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 U2.21-201ENST00000637295 81 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.24□□□□□ -1.89
USP44Q9H0E7 MTND4P5-201ENST00000435821 1374 ntBASIC3.24□□□□□ -1.89
USP44Q9H0E7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
USP44Q9H0E7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
USP44Q9H0E7 Y_RNA.159-201ENST00000363674 87 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 RNU6-395P-201ENST00000365662 106 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.23□□□□□ -1.89
USP44Q9H0E7 AC114491.1-201ENST00000416095 246 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 AC009963.1-201ENST00000417265 157 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 HSPE1P1-201ENST00000421494 318 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 AL592045.1-201ENST00000429867 352 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 RPS15AP9-201ENST00000439856 381 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.23□□□□□ -1.89
USP44Q9H0E7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.23□□□□□ -1.89
USP44Q9H0E7 RPL26P9-201ENST00000457466 433 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 UBE2DNL-203ENST00000474922 222 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.23□□□□□ -1.89
USP44Q9H0E7 RNA5SP148-201ENST00000516527 94 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 RNU6-1315P-201ENST00000517187 99 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.23□□□□□ -1.89
USP44Q9H0E7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.23□□□□□ -1.89
USP44Q9H0E7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.23□□□□□ -1.89
USP44Q9H0E7 AL391261.3-201ENST00000557194 520 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.23□□□□□ -1.89
USP44Q9H0E7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.23□□□□□ -1.89
USP44Q9H0E7 NUTF2P8-201ENST00000604593 363 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 AC007684.1-201ENST00000609671 477 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 AC017083.3-201ENST00000609955 700 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 AC130324.3-201ENST00000614165 542 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 MIR6817-201ENST00000615588 66 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 AC093648.1-201ENST00000623546 606 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 AC243829.7-201ENST00000633081 225 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 AL512643.1-201ENST00000635735 524 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
USP44Q9H0E7 AC099654.7-201ENST00000635788 2127 ntBASIC3.23□□□□□ -1.89
USP44Q9H0E7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
USP44Q9H0E7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.23□□□□□ -1.89
USP44Q9H0E7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.22□□□□□ -1.89
USP44Q9H0E7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
USP44Q9H0E7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
USP44Q9H0E7 AL161431.1-201ENST00000618966 4205 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.22□□□□□ -1.89
USP44Q9H0E7 SNORD62.1-201ENST00000362541 86 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 RNU6-778P-201ENST00000363269 103 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 RNU6-884P-201ENST00000363889 107 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 RNU1-73P-201ENST00000383971 164 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 MIR1-2-201ENST00000384961 85 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 SAR1AP2-201ENST00000392696 594 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
USP44Q9H0E7 RNU4-55P-201ENST00000410731 137 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 Y_RNA.619-201ENST00000410951 90 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 AL365496.1-201ENST00000426885 215 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 MTCO2P19-201ENST00000427513 598 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 AC098831.1-201ENST00000440661 216 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.22□□□□□ -1.89
USP44Q9H0E7 RPL23AP20-201ENST00000447965 421 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 RPL12P25-201ENST00000455592 494 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 RPL23AP11-201ENST00000475260 469 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.22□□□□□ -1.89
USP44Q9H0E7 RNU6-506P-201ENST00000516553 94 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.22□□□□□ -1.89
USP44Q9H0E7 MTCO3P24-201ENST00000572729 782 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 MIR4775-201ENST00000581168 75 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.22□□□□□ -1.89
USP44Q9H0E7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.22□□□□□ -1.89
USP44Q9H0E7 Z84480.1-201ENST00000605131 311 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 MIR15A-201ENST00000607334 83 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 AF250324.2-201ENST00000608299 610 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 AC004832.5-201ENST00000608677 401 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.22□□□□□ -1.89
USP44Q9H0E7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
USP44Q9H0E7 AC092608.2-201ENST00000624427 218 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 AL157786.1-207ENST00000627771 695 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.22□□□□□ -1.89
USP44Q9H0E7 MIR6863-201ENST00000636112 90 ntBASIC3.22□□□□□ -1.89
USP44Q9H0E7 Z99571.1-201ENST00000636677 394 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms