Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 Y_RNA.216-201ENST00000364205 93 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-310P-201ENST00000384655 107 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-328P-201ENST00000390887 106 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-1050P-201ENST00000410388 107 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-1025P-201ENST00000410629 104 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 Y_RNA.646-201ENST00000410980 101 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 MTND2P23-201ENST00000422990 651 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 UBE2D3P2-201ENST00000424409 445 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 AC009237.8-201ENST00000445492 379 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-1045P-201ENST00000516321 107 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 SNORA74D-201ENST00000516404 141 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 Y_RNA.711-201ENST00000516993 102 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 AP003122.3-201ENST00000526316 255 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 AC084851.1-201ENST00000529105 249 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 SNRPGP18-201ENST00000553000 214 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 HSPE1P5-201ENST00000561489 272 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 AC006504.6-201ENST00000590142 199 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 AC244505.7-201ENST00000599675 272 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 AP000654.2-201ENST00000605633 586 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 SNORA62.6-201ENST00000606322 83 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 AC039056.2-201ENST00000622261 511 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 uc_338.22-201ENST00000622722 187 ntBASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
AMBRA1Q9C0C7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 USP8P1-201ENST00000494673 3183 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 AC005183.1-201ENST00000603687 1979 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 KPNA2P1-201ENST00000458289 1591 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 SNORA31-201ENST00000362607 130 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 RNA5SP97-201ENST00000365006 84 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-1329P-201ENST00000365664 107 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 MIR606-201ENST00000384851 96 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 RNU2-33P-201ENST00000410344 192 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 AL445584.1-201ENST00000431451 330 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 PIGFP3-201ENST00000441918 722 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 CECR9-201ENST00000453421 199 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 AC026782.1-201ENST00000512952 449 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 RNU1-86P-201ENST00000516108 154 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 MIR892C-201ENST00000516410 77 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 RNU1-107P-201ENST00000516617 154 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 Y_RNA.708-201ENST00000516950 96 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 RNU6-1213P-201ENST00000517075 94 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 AC022695.1-201ENST00000522089 237 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 OR1M4P-201ENST00000589199 287 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 AC007179.3-201ENST00000604976 235 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 AC018462.2-201ENST00000605375 395 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 AL669831.3-213ENST00000636676 183 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AMBRA1Q9C0C7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.46□□□□□ -1.85
AMBRA1Q9C0C7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
AMBRA1Q9C0C7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 AC116096.1-201ENST00000566804 2314 ntBASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 Y_RNA.31-201ENST00000362574 102 ntBASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 RNU6-741P-201ENST00000383889 107 ntBASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 SNORA75B-201ENST00000384053 137 ntBASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 RNU6-293P-201ENST00000411259 106 ntBASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 Z99755.1-201ENST00000414048 380 ntBASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 KC877373.1-201ENST00000479066 408 ntBASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 SMURF2P1-201ENST00000514992 481 ntBASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 Y_RNA.670-201ENST00000516255 105 ntBASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 RNU2-58P-201ENST00000516403 183 ntBASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
AMBRA1Q9C0C7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms