Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC092427.1-202ENST00000430569 476 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AL139132.1-201ENST00000431587 344 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC092573.2-201ENST00000434546 243 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 RPS15AP9-201ENST00000439856 381 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 PIGFP3-201ENST00000441918 722 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 RPL21P133-201ENST00000443666 476 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC133134.1-201ENST00000466800 359 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC009646.1-201ENST00000510455 318 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC108078.2-201ENST00000510750 236 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 SNORA67.7-201ENST00000516664 135 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 MTND1P5-201ENST00000517906 940 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 HMGB1P33-201ENST00000563485 527 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 MIR5694-201ENST00000581190 76 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC098826.3-201ENST00000603823 466 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC008536.2-201ENST00000607284 349 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 MIR6895-201ENST00000613497 78 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC006133.1-201ENST00000617106 264 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC068792.1-201ENST00000621354 417 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC025034.2-201ENST00000623264 286 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AC139792.3-201ENST00000623525 224 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 AL359693.1-201ENST00000614959 2407 ntBASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC28BQ9BUN5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 Y_RNA.245-201ENST00000364493 95 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 EEF1A1P41-201ENST00000414667 207 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AC080125.1-201ENST00000414888 684 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 EIF1P1-201ENST00000421436 341 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AL353193.1-201ENST00000421444 268 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 RPL7P37-201ENST00000425095 738 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AC007919.1-201ENST00000429380 217 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AL591212.2-201ENST00000433923 257 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AL512844.2-201ENST00000433990 593 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 MTND1P4-201ENST00000435196 415 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AC093899.1-201ENST00000457984 376 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 GMFBP1-201ENST00000467831 427 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 Y_RNA.693-201ENST00000516641 110 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 RNA5SP290-201ENST00000517133 127 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 IGLV3-17-201ENST00000519099 244 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AC104383.1-201ENST00000530297 370 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 ADI1P3-201ENST00000549509 470 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AL157687.1-201ENST00000554853 619 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 MIR4775-201ENST00000581168 75 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AL645944.1-201ENST00000603857 493 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AL161798.1-201ENST00000604630 131 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AF250324.2-201ENST00000608299 610 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AC092954.2-201ENST00000609103 430 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AC092794.1-201ENST00000612734 582 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AC012409.4-201ENST00000612923 249 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AL157786.1-207ENST00000627771 695 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 U6.114-201ENST00000636407 96 ntBASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC28BQ9BUN5 AL139276.1-201ENST00000311910 1001 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 Y_RNA.9-201ENST00000362354 101 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 RNU1-112P-201ENST00000364401 164 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 SNORA18.3-201ENST00000384122 132 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 CIR1P3-201ENST00000405137 479 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 RNU2-9P-201ENST00000410194 145 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 MTND1P23-201ENST00000416931 372 ntBASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC28BQ9BUN5 MTCYBP5-201ENST00000423752 1135 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms