Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AL138752.1-201ENST00000452964 351 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 AC005921.1-201ENST00000510589 286 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 RNA5SP165-201ENST00000517142 115 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 AC104581.2-201ENST00000572227 430 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 RN7SL690P-201ENST00000582087 240 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 AC099506.2-201ENST00000623074 221 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 AC091905.2-201ENST00000623143 306 ntBASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM56Q9BRZ2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 LINC02555-201ENST00000563933 1951 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 Y_RNA.54-201ENST00000362766 105 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 RNU6-227P-201ENST00000362865 103 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 RNY3P4-201ENST00000384428 101 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 SNORA12.2-201ENST00000391040 156 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 RPL21P75-201ENST00000396599 483 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 RPL21P28-201ENST00000401418 483 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 RNA5SP36-201ENST00000410197 133 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 AL590556.1-201ENST00000423231 483 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 BX679664.1-201ENST00000434429 253 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 RPL21P11-201ENST00000461458 483 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 RPL21P39-201ENST00000463605 483 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 RPS26P28-201ENST00000470806 348 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 AC132942.1-201ENST00000486753 483 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 AC093591.1-201ENST00000491435 481 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 RPL21P16-201ENST00000495531 483 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 Y_RNA.706-201ENST00000516933 99 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 DEFB108E-201ENST00000524692 240 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 MTND6P33-201ENST00000571794 183 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 AC136601.2-201ENST00000604356 474 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 AC010900.2-201ENST00000604508 210 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 AC004792.1-201ENST00000614523 137 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 SCARNA4-202ENST00000625402 129 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 U6.92-201ENST00000636464 89 ntBASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM56Q9BRZ2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 CPHL1P-201ENST00000461341 3407 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 ZNF137P-201ENST00000456718 1920 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 U3.6-201ENST00000363622 211 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 Y_RNA.358-201ENST00000365491 99 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 MIR215-201ENST00000384858 110 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 PPIAP31-201ENST00000405422 495 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 AL603910.2-201ENST00000407268 136 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 RNU2-14P-201ENST00000411053 191 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 AC092047.1-201ENST00000424997 240 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 RPS12P10-201ENST00000427031 377 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 MTCO3P29-201ENST00000432119 779 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 SNRPEP9-201ENST00000436794 238 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 AC069285.2-201ENST00000440210 275 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 RPL23AP24-201ENST00000458203 385 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 AC092798.1-201ENST00000458542 409 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 NIP7P2-201ENST00000485801 544 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 RNU7-175P-201ENST00000515915 61 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 RNU6-572P-201ENST00000516724 80 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 SYF2P1-201ENST00000550658 413 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 MIR4300-201ENST00000581016 96 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 RPL23AP78-201ENST00000599928 470 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 Y_RNA.772-201ENST00000606692 102 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 MIR7154-201ENST00000620673 73 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 OR14L1P-202ENST00000641545 3009 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 AP001148.1-201ENST00000624124 2359 ntBASIC4.53□□□□□ -1.68
TRIM56Q9BRZ2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 MIR448-201ENST00000362131 111 ntBASIC4.52□□□□□ -1.69
TRIM56Q9BRZ2 Y_RNA.65-201ENST00000362846 100 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms