Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 RPS12P24-201ENST00000412619 387 ntBASIC1.16□□□□□ -2.22
LYSMD1Q96S90 AL353621.1-201ENST00000418219 243 ntBASIC1.16□□□□□ -2.22
LYSMD1Q96S90 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.16□□□□□ -2.22
LYSMD1Q96S90 CR848007.2-201ENST00000424918 787 ntBASIC1.16□□□□□ -2.22
LYSMD1Q96S90 UBE2V1P4-201ENST00000425374 344 ntBASIC1.16□□□□□ -2.22
LYSMD1Q96S90 AC092427.1-201ENST00000439177 601 ntBASIC1.16□□□□□ -2.22
LYSMD1Q96S90 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.16□□□□□ -2.22
LYSMD1Q96S90 AC108078.2-201ENST00000510750 236 ntBASIC1.16□□□□□ -2.22
LYSMD1Q96S90 AC079598.5-201ENST00000547460 117 ntBASIC1.16□□□□□ -2.22
LYSMD1Q96S90 AC044913.1-201ENST00000557200 430 ntBASIC1.16□□□□□ -2.22
LYSMD1Q96S90 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.16□□□□□ -2.22
LYSMD1Q96S90 AC023825.1-201ENST00000566704 1030 ntBASIC1.16□□□□□ -2.22
LYSMD1Q96S90 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.16□□□□□ -2.22
LYSMD1Q96S90 AC016911.1-201ENST00000613297 452 ntBASIC1.16□□□□□ -2.22
LYSMD1Q96S90 U1.36-201ENST00000620684 176 ntBASIC1.16□□□□□ -2.22
LYSMD1Q96S90 AC017037.3-201ENST00000625016 472 ntBASIC1.16□□□□□ -2.22
LYSMD1Q96S90 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.15□□□□□ -2.22
LYSMD1Q96S90 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 RNU6-481P-201ENST00000384194 107 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 RNU6-658P-201ENST00000384606 106 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 BTF3L4P3-201ENST00000418879 476 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL591704.2-201ENST00000421658 181 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 C1DP1-201ENST00000426049 402 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AC010153.1-201ENST00000432862 727 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 FCF1P6-201ENST00000456841 595 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AC112771.1-201ENST00000463581 102 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AC006512.1-201ENST00000468816 291 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 PSMA3P-201ENST00000555485 635 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL670379.6-201ENST00000603753 252 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL670379.11-201ENST00000604059 253 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL670379.10-201ENST00000604330 253 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AC008162.1-201ENST00000604718 254 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL670379.1-201ENST00000604752 252 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 ELOCP5-201ENST00000604924 333 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL670379.2-201ENST00000604983 252 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL670379.5-201ENST00000605253 252 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL670379.4-201ENST00000605279 254 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL670379.12-201ENST00000605291 253 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL670379.8-201ENST00000605353 252 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL670379.9-201ENST00000605428 253 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 PRR13P7-201ENST00000605538 430 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL670379.7-201ENST00000605823 252 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 AL359314.1-201ENST00000616913 261 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 MIR1322-201ENST00000638013 71 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.15□□□□□ -2.23
LYSMD1Q96S90 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
LYSMD1Q96S90 SNRPEP3-201ENST00000338402 276 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 SNORD115-3-201ENST00000363100 82 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 RNU1-23P-201ENST00000363361 144 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 Y_RNA.234-201ENST00000364409 97 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 RNU6-53P-201ENST00000365367 106 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 AC083799.1-201ENST00000366451 910 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 RNU6-883P-201ENST00000384597 107 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 DHFRP6-201ENST00000401776 268 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.14□□□□□ -2.23
LYSMD1Q96S90 USP9YP22-201ENST00000438971 294 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 HMGN2P18-201ENST00000450680 270 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 AC005840.1-201ENST00000498412 377 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 TRMT112P2-201ENST00000512910 132 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 RNU6-1261P-201ENST00000517194 104 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
LYSMD1Q96S90 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.14□□□□□ -2.23
LYSMD1Q96S90 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.14□□□□□ -2.23
LYSMD1Q96S90 AP001189.2-201ENST00000527320 189 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.14□□□□□ -2.23
LYSMD1Q96S90 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.14□□□□□ -2.23
LYSMD1Q96S90 AC098848.2-201ENST00000588023 330 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 AC021646.1-201ENST00000605469 484 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 AC012360.2-201ENST00000609349 391 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 AC019226.1-201ENST00000625666 515 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 AC091812.1-201ENST00000432235 1948 ntBASIC1.14□□□□□ -2.23
LYSMD1Q96S90 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
LYSMD1Q96S90 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
LYSMD1Q96S90 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LYSMD1Q96S90 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LYSMD1Q96S90 Y_RNA.25-201ENST00000362528 102 ntBASIC1.13□□□□□ -2.23
LYSMD1Q96S90 RNY1P10-201ENST00000363268 113 ntBASIC1.13□□□□□ -2.23
LYSMD1Q96S90 BTF3L4P2-201ENST00000392798 346 ntBASIC1.13□□□□□ -2.23
LYSMD1Q96S90 OR51A5P-201ENST00000415429 942 ntBASIC1.13□□□□□ -2.23
LYSMD1Q96S90 RPL30P13-201ENST00000418873 348 ntBASIC1.13□□□□□ -2.23
LYSMD1Q96S90 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.13□□□□□ -2.23
LYSMD1Q96S90 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms