Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.08□□□□□ -1.76
ERCC4Q92889 AC107294.1-201ENST00000609524 467 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 RMST_8.1-201ENST00000610287 165 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 AC040896.1-201ENST00000613819 479 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 AL157817.1-201ENST00000614264 790 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 AL355810.1-201ENST00000614629 552 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.08□□□□□ -1.76
ERCC4Q92889 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
ERCC4Q92889 AC048347.1-201ENST00000624621 427 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.08□□□□□ -1.76
ERCC4Q92889 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.08□□□□□ -1.76
ERCC4Q92889 AC119674.1-207ENST00000641355 633 ntBASIC4.08□□□□□ -1.76
ERCC4Q92889 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
ERCC4Q92889 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ERCC4Q92889 MIR591-201ENST00000385290 95 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 Y_RNA.646-201ENST00000410980 101 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 CYCSP33-201ENST00000414485 327 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 AL353621.1-201ENST00000418219 243 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 AL592045.1-201ENST00000429867 352 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.07□□□□□ -1.76
ERCC4Q92889 HIGD1AP11-201ENST00000438361 280 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 RPS29P7-201ENST00000439662 171 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.07□□□□□ -1.76
ERCC4Q92889 AC006539.3-201ENST00000454258 129 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.07□□□□□ -1.76
ERCC4Q92889 RPS20P22-201ENST00000473700 357 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.07□□□□□ -1.76
ERCC4Q92889 AL049874.1-201ENST00000489560 388 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 MTND3P25-201ENST00000509243 135 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.07□□□□□ -1.76
ERCC4Q92889 SMURF2P1-201ENST00000514992 481 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 AP006245.1-201ENST00000522549 120 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.07□□□□□ -1.76
ERCC4Q92889 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ERCC4Q92889 MIR548AC-201ENST00000585049 88 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 AL161798.1-201ENST00000604630 131 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 AP000654.2-201ENST00000605633 586 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 AL354798.1-201ENST00000622505 329 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.07□□□□□ -1.76
ERCC4Q92889 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.07□□□□□ -1.76
ERCC4Q92889 AL669831.3-213ENST00000636676 183 ntBASIC4.07□□□□□ -1.76
ERCC4Q92889 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.07□□□□□ -1.76
ERCC4Q92889 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.06□□□□□ -1.76
ERCC4Q92889 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.06□□□□□ -1.76
ERCC4Q92889 RNU6-1167P-201ENST00000363227 94 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 SNORA22B-201ENST00000383876 138 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.06□□□□□ -1.76
ERCC4Q92889 AC063979.1-201ENST00000415539 377 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 CRYBB2P1-203ENST00000415709 538 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 AL591419.1-201ENST00000427423 339 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.06□□□□□ -1.76
ERCC4Q92889 RNU7-138P-201ENST00000459479 64 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 RPL7P5-201ENST00000471472 736 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 AP002884.2-201ENST00000471647 395 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 AC097473.1-201ENST00000508142 408 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 AC008716.1-201ENST00000511084 513 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.06□□□□□ -1.76
ERCC4Q92889 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.06□□□□□ -1.76
ERCC4Q92889 MIR1273C-201ENST00000578669 77 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.06□□□□□ -1.76
ERCC4Q92889 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.06□□□□□ -1.76
ERCC4Q92889 AC090132.2-201ENST00000615881 347 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 AL031601.2-202ENST00000622650 282 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.06□□□□□ -1.76
ERCC4Q92889 Z99571.1-201ENST00000636677 394 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.06□□□□□ -1.76
ERCC4Q92889 AP000553.6-201ENST00000641242 118 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 AL732372.2-225ENST00000642124 456 ntBASIC4.06□□□□□ -1.76
ERCC4Q92889 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ERCC4Q92889 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ERCC4Q92889 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ERCC4Q92889 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.06□□□□□ -1.76
ERCC4Q92889 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ERCC4Q92889 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ERCC4Q92889 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ERCC4Q92889 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
ERCC4Q92889 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ERCC4Q92889 RNU6-1115P-201ENST00000362490 106 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ERCC4Q92889 DBIP2-201ENST00000419076 262 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 RPS15AP6-201ENST00000420703 385 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 AL645568.3-201ENST00000433683 316 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 NOTCH2P1-201ENST00000443481 624 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 RPL21P23-201ENST00000446654 460 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.05□□□□□ -1.76
ERCC4Q92889 RPL23AP31-201ENST00000456160 467 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 RPL30P15-201ENST00000457129 321 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 AC022493.1-201ENST00000492984 337 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.05□□□□□ -1.76
ERCC4Q92889 AC092436.3-201ENST00000511788 257 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 RNA5SP164-201ENST00000516533 110 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 SNORA70.18-201ENST00000516696 98 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 RNU6-1213P-201ENST00000517075 94 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 RNU6-1315P-201ENST00000517187 99 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.05□□□□□ -1.76
ERCC4Q92889 AC004024.1-201ENST00000549244 247 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 AC026371.1-201ENST00000551867 419 ntBASIC4.05□□□□□ -1.76
ERCC4Q92889 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.05□□□□□ -1.76
ERCC4Q92889 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.05□□□□□ -1.76
ERCC4Q92889 AC006077.1-201ENST00000604746 343 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms