Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AL513302.2-201ENST00000562313 1842 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 MIR412-201ENST00000362142 91 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 SNORD3E-201ENST00000362899 217 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 Y_RNA.86-201ENST00000363020 111 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 U3.12-201ENST00000364498 214 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 RNA5SP252-201ENST00000391131 119 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AL391417.1-201ENST00000404100 426 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 RPS4XP7-201ENST00000406274 780 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 RNU4-26P-201ENST00000410270 107 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 POLHP1-201ENST00000411806 470 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 RPL26P27-201ENST00000414397 437 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 HMGN2P30-201ENST00000423237 256 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AC236972.1-201ENST00000433225 199 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AC018710.1-201ENST00000506509 158 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 RNU6-572P-201ENST00000516724 80 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AP006245.1-201ENST00000522549 120 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AL391261.3-201ENST00000557194 520 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 LRRC37A5P-203ENST00000580181 585 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 MIR4298-201ENST00000584380 73 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AL355598.1-201ENST00000604169 202 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 BNIP3P10-201ENST00000605360 577 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 U2.17-201ENST00000611454 95 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 U6.42-201ENST00000618440 107 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AC090617.10-201ENST00000624308 134 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGB4Q8WW32 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HMGB4Q8WW32 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HMGB4Q8WW32 RNU1-73P-201ENST00000383971 164 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 RNY3P14-201ENST00000384309 102 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 RNU6-166P-201ENST00000384371 107 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 Y_RNA.500-201ENST00000384466 111 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 RNU6-876P-201ENST00000391295 104 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 RNU2-3P-201ENST00000410144 191 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 RNU6-607P-201ENST00000411283 108 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AC138393.2-201ENST00000414742 246 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AL714022.1-201ENST00000439897 151 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 NDUFB1P2-201ENST00000449477 176 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 MTATP6P7-201ENST00000453315 681 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 UBE2DNL-203ENST00000474922 222 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AC096576.1-201ENST00000489014 359 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 RPL23AP94-201ENST00000512518 302 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HMGB4Q8WW32 RNU1-86P-201ENST00000516108 154 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 RNU1-107P-201ENST00000516617 154 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AC023050.3-201ENST00000541142 333 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AC018638.8-201ENST00000588755 281 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AC092747.3-201ENST00000603769 301 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AL157817.1-201ENST00000614264 790 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AC103705.1-201ENST00000619013 241 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AC022149.2-201ENST00000621061 203 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AC100810.6-201ENST00000638068 285 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 AC121333.1-201ENST00000567488 2709 ntBASIC3.3□□□□□ -1.88
HMGB4Q8WW32 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGB4Q8WW32 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 Y_RNA.160-201ENST00000363677 92 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 RNU6-1303P-201ENST00000364841 107 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 Y_RNA.303-201ENST00000364998 94 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 RNA5SP219-201ENST00000390940 113 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AL162578.1-201ENST00000406202 378 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AC126124.2-201ENST00000413542 321 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AL592148.1-201ENST00000413568 445 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 CYCSP33-201ENST00000414485 327 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AL353729.1-201ENST00000425044 720 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 NEK4P1-201ENST00000433383 879 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AL583843.1-201ENST00000456070 346 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AL590639.1-201ENST00000456484 337 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AC092798.1-201ENST00000458542 409 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 RPL23AP67-201ENST00000465341 474 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AP000852.1-201ENST00000472460 573 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 HMGN2P13-201ENST00000476476 274 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 HMGB1P30-201ENST00000492455 606 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 MTCO2P30-201ENST00000503662 364 ntBASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.29□□□□□ -1.88
HMGB4Q8WW32 RNU6-189P-201ENST00000516120 101 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 285 ms