Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AF213884.2-201ENST00000510417 903 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 CBX3P8-201ENST00000532412 525 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 APOOP3-201ENST00000536787 586 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 MIR4711-201ENST00000578274 70 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC073413.2-201ENST00000604332 360 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC011939.3-201ENST00000613686 466 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC006213.4-201ENST00000616184 634 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC016716.1-201ENST00000265882 708 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 SNORD82-201ENST00000365530 70 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC023141.4-201ENST00000412031 328 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 Z99497.1-201ENST00000421282 135 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC008850.1-201ENST00000427546 362 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 COX7BP2-201ENST00000437976 242 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC055731.1-201ENST00000474387 401 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 RPL22P13-201ENST00000493291 347 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 XIAPP1-201ENST00000603162 600 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC239868.4-201ENST00000608318 671 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 RMST_10.1-201ENST00000616309 154 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC005832.2-201ENST00000538921 1430 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 CBX3P1-201ENST00000325243 554 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 RNU6-1005P-201ENST00000384519 107 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AL591212.2-201ENST00000433923 257 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC026414.1-201ENST00000504046 698 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 SEPT7P9-203ENST00000604116 343 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 RNU6-609P-201ENST00000365459 107 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 XKRYP1-201ENST00000423438 492 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AL591043.1-201ENST00000432461 424 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 XKRYP2-201ENST00000432915 492 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC015922.2-201ENST00000435593 184 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 COX7A2P2-201ENST00000505291 250 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC073968.1-201ENST00000618594 637 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 MIR6513-201ENST00000621188 64 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 MKKS-204ENST00000639674 192 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AL079343.1-201ENST00000572358 1771 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 RNU1-62P-201ENST00000362599 164 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 SNORA62.1-201ENST00000364287 154 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 SNORD116-23-201ENST00000384645 92 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 MIR16-1-201ENST00000385271 89 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 RAC1P8-201ENST00000427086 527 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 ELOCP14-201ENST00000428070 331 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AL512637.2-201ENST00000431287 1256 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 ELOCP7-201ENST00000439968 331 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AL391261.3-201ENST00000557194 520 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC021646.1-201ENST00000605469 484 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC092608.3-201ENST00000625017 386 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 RNU6-884P-201ENST00000363889 107 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 RNU6-270P-201ENST00000364131 105 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 Y_RNA.234-201ENST00000364409 97 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 Y_RNA.518-201ENST00000384552 113 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 PTGES3P2-201ENST00000407942 482 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 FCF1P2-201ENST00000415284 583 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC000111.3-201ENST00000433478 193 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 USP9YP35-201ENST00000435696 412 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC234064.1-201ENST00000436312 247 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 DDX3P2-201ENST00000446138 111 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC008837.2-201ENST00000513076 418 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 MRPS36P5-201ENST00000551909 298 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 MIR4713-201ENST00000582691 75 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AP000654.2-201ENST00000605633 586 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AL390208.1-201ENST00000605885 644 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC016911.1-201ENST00000613297 452 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC011477.1-204ENST00000623416 1325 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 RPL21P90-201ENST00000415692 466 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC244035.1-201ENST00000430042 390 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AL049734.2-201ENST00000441066 616 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 OR6C5P-201ENST00000452388 923 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 MTND2P6-201ENST00000455337 1030 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 MTND4LP3-201ENST00000468320 276 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AL121769.1-201ENST00000469473 401 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.35□□□□□ -2.35
SYNE1Q8NF91 BNIP3P23-201ENST00000599655 511 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC133794.1-201ENST00000602731 914 ntBASIC0.35□□□□□ -2.35
SYNE1Q8NF91 AC092881.1-201ENST00000638218 2733 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.34□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms