Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 MIR208A-201ENST00000362287 71 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 RNU6-562P-201ENST00000362731 107 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 Y_RNA.364-201ENST00000365532 101 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 Y_RNA.463-201ENST00000384271 102 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 MIR7-3-201ENST00000384898 110 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 MT-TG-201ENST00000387429 68 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 TBCAP3-201ENST00000512475 312 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 RNU6-1016P-201ENST00000516689 94 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 RNU6-1282P-201ENST00000516735 96 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 RANP3-201ENST00000530970 276 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 AC090115.3-201ENST00000553218 849 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 GNRHR2P1-201ENST00000555315 631 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 HMGB1P14-201ENST00000557424 591 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 MIR3186-201ENST00000577404 85 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 MIR6128-201ENST00000615528 109 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 AC090132.2-201ENST00000615881 347 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 AL162373.1-201ENST00000620433 407 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 PLCE1P1-201ENST00000622094 305 ntBASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
SIMC1Q8NDZ2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 SNORD3E-201ENST00000362899 217 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 Y_RNA.252-201ENST00000364556 101 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 RNU6-702P-201ENST00000364982 107 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 SMIM11P1-201ENST00000369586 178 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 RNU6-946P-201ENST00000383878 107 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 RNU6-784P-201ENST00000384330 106 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 RNY1P14-201ENST00000384426 108 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 MIR591-201ENST00000385290 95 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 SNORD70.1-201ENST00000391007 85 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 MIR1302-3-201ENST00000408128 138 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 Y_RNA.618-201ENST00000410949 107 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AC009310.1-201ENST00000414414 451 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 RPL7P10-201ENST00000417407 739 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 CALM2P2-201ENST00000428512 440 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AC083863.1-201ENST00000438811 231 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 RANP8-201ENST00000444720 713 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 VN1R105P-201ENST00000486595 910 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 RN7SL283P-201ENST00000489055 303 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 RNU6-927P-201ENST00000516199 100 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 SCARNA13-201ENST00000516672 275 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 RNU6-352P-201ENST00000516908 107 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 RN7SKP258-201ENST00000517151 304 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AC087369.1-201ENST00000520775 996 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AC004024.1-201ENST00000549244 247 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AL161670.1-201ENST00000554348 137 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 MTCO3P23-201ENST00000561363 289 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AC106782.4-201ENST00000568264 210 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AC005951.2-201ENST00000576282 495 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 MIR5692C1-201ENST00000585309 91 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 BNIP3P16-201ENST00000589779 534 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AC006157.1-201ENST00000611750 366 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AL138880.2-201ENST00000616214 239 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 MIR6875-201ENST00000617506 72 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AC027309.3-201ENST00000623419 351 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AL732372.2-225ENST00000642124 456 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AC007785.2-201ENST00000598627 1916 ntBASIC3.68□□□□□ -1.82
SIMC1Q8NDZ2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 Y_RNA.404-201ENST00000383978 102 ntBASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 RNU6-26P-201ENST00000383985 107 ntBASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 Y_RNA.473-201ENST00000384333 102 ntBASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 MIR483-201ENST00000385070 76 ntBASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 SNORA16.2-201ENST00000390991 127 ntBASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 AC096644.2-201ENST00000429278 159 ntBASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 GAPDHP27-201ENST00000447427 1020 ntBASIC3.67□□□□□ -1.82
SIMC1Q8NDZ2 PRSS3P4-201ENST00000453323 162 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms