Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AC062037.2-201ENST00000610137 73 ntBASIC4.4□□□□□ -1.71
PHC3Q8NDX5 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.4□□□□□ -1.71
PHC3Q8NDX5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PHC3Q8NDX5 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PHC3Q8NDX5 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PHC3Q8NDX5 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.4□□□□□ -1.71
PHC3Q8NDX5 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PHC3Q8NDX5 FAM35BP-202ENST00000497389 3337 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 ZNF962P-201ENST00000443465 3140 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PHC3Q8NDX5 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PHC3Q8NDX5 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.39□□□□□ -1.71
PHC3Q8NDX5 FTLP6-201ENST00000355274 422 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 RNU6-874P-201ENST00000362390 105 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 RNU1-32P-201ENST00000363937 159 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 RNU6-217P-201ENST00000384164 104 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 MIR129-1-201ENST00000384972 72 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 RPS29P13-201ENST00000402041 169 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 U3.37-201ENST00000408528 213 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.39□□□□□ -1.71
PHC3Q8NDX5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.39□□□□□ -1.71
PHC3Q8NDX5 RPL21P2-201ENST00000440049 481 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 HIGD1AP2-201ENST00000446367 280 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 MTATP6P7-201ENST00000453315 681 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 RN7SKP210-201ENST00000459176 261 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.39□□□□□ -1.71
PHC3Q8NDX5 Y_RNA.668-201ENST00000516233 93 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 RNU6-703P-201ENST00000516946 107 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 AP004607.1-201ENST00000524456 203 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 AL390123.1-201ENST00000603216 237 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 MTND4LP5-201ENST00000605152 292 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 HMGB1P50-201ENST00000605814 607 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 FTX_3.1-201ENST00000610451 147 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 AC107871.2-201ENST00000612894 502 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 MIR8062-201ENST00000621515 85 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 MIR4727-201ENST00000622232 55 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 U6.104-201ENST00000637979 90 ntBASIC4.39□□□□□ -1.71
PHC3Q8NDX5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PHC3Q8NDX5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PHC3Q8NDX5 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.38□□□□□ -1.71
PHC3Q8NDX5 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PHC3Q8NDX5 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.38□□□□□ -1.71
PHC3Q8NDX5 AC032011.1-201ENST00000611703 1549 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 SNORD50.1-201ENST00000362987 71 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 U3.6-201ENST00000363622 211 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 RNA5SP447-201ENST00000363749 119 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 RNU6-336P-201ENST00000364891 107 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 RNU6-784P-201ENST00000384330 106 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 BTF3L4P2-201ENST00000392798 346 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 RPL21P1-201ENST00000399532 476 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 RNA5SP31-201ENST00000411144 127 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 CRYBB2P1-203ENST00000415709 538 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 HMGN2P30-201ENST00000423237 256 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.38□□□□□ -1.71
PHC3Q8NDX5 RPL37P4-201ENST00000448908 268 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.38□□□□□ -1.71
PHC3Q8NDX5 PCNPP5-201ENST00000452246 481 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 RNU6-1143P-201ENST00000516125 104 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 SNORA40.15-201ENST00000516884 107 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 RNU6-1183P-201ENST00000517054 60 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 IGLVIV-65-201ENST00000517313 360 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 OR5D17P-201ENST00000531492 978 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.38□□□□□ -1.71
PHC3Q8NDX5 LINC00933-203ENST00000559812 219 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 AMZ2P1-203ENST00000565833 850 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.38□□□□□ -1.71
PHC3Q8NDX5 AC023575.1-201ENST00000580510 358 ntBASIC4.38□□□□□ -1.71
PHC3Q8NDX5 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
PHC3Q8NDX5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PHC3Q8NDX5 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PHC3Q8NDX5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.38□□□□□ -1.71
PHC3Q8NDX5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PHC3Q8NDX5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PHC3Q8NDX5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PHC3Q8NDX5 Y_RNA.288-201ENST00000364854 92 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PHC3Q8NDX5 DEFB109C-201ENST00000382575 264 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 DEFB109B-201ENST00000382656 264 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 Y_RNA.512-201ENST00000384518 102 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 RNU6-658P-201ENST00000384606 106 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 RNA5SP494-201ENST00000410653 129 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 SNORA74C-2-201ENST00000411179 201 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 RPS20P14-201ENST00000412545 360 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 RPL26P27-201ENST00000414397 437 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 TMSB10P2-201ENST00000416049 131 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.37□□□□□ -1.71
PHC3Q8NDX5 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.37□□□□□ -1.71
PHC3Q8NDX5 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.37□□□□□ -1.71
PHC3Q8NDX5 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.37□□□□□ -1.71
PHC3Q8NDX5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.37□□□□□ -1.71
PHC3Q8NDX5 RNU1-103P-201ENST00000516502 125 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 MIR2114-201ENST00000516645 80 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 SNORA31.18-201ENST00000517043 134 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 IGHV3-76-201ENST00000522465 295 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.37□□□□□ -1.71
PHC3Q8NDX5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.37□□□□□ -1.71
PHC3Q8NDX5 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PHC3Q8NDX5 AC090617.7-201ENST00000623952 126 ntBASIC4.37□□□□□ -1.71
PHC3Q8NDX5 MIR7641-1-201ENST00000627518 61 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms