Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AC012435.1-202ENST00000568772 240 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AC074051.3-201ENST00000570238 358 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AC073569.3-201ENST00000619055 682 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 RNA5SP258-201ENST00000362750 119 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 RNU6-730P-201ENST00000383954 104 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 RPL36P19-201ENST00000430744 301 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 RNU6-798P-201ENST00000516912 103 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 SNORA44.1-201ENST00000517031 108 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 IGLVI-20-201ENST00000519296 130 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 VN1R82P-201ENST00000601481 356 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 AC040174.2-201ENST00000602701 465 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 AP001485.1-201ENST00000604799 199 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 AC103710.4-201ENST00000609301 899 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 AC106800.4-201ENST00000614905 153 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 AC006213.4-201ENST00000616184 634 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 RNU4-23P-201ENST00000362839 140 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 RNA5SP368-201ENST00000364298 116 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 U6atac.2-201ENST00000408644 118 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 TAAR7P-201ENST00000436141 242 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 MTND6P13-201ENST00000443510 523 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 MTCYBP3-201ENST00000445588 1137 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 RNU6-775P-201ENST00000459318 96 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 RNU6-27P-201ENST00000516146 107 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 HMGB1P14-201ENST00000557424 591 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 AC022254.1-201ENST00000567857 235 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 AP001269.3-201ENST00000588718 329 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 FAM60CP-201ENST00000591086 664 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 AC104763.3-201ENST00000613765 618 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 AL391516.1-201ENST00000554380 2449 ntBASIC0.42□□□□□ -2.34
CSPG4Q6UVK1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AL356421.1-201ENST00000403255 413 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 RNA5SP266-201ENST00000410273 108 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 RPS15AP38-201ENST00000413110 372 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 MTND5P14-201ENST00000441481 1267 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC097499.1-201ENST00000444277 208 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC023512.1-201ENST00000444513 499 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 RNU7-23P-201ENST00000459465 62 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AP001025.1-201ENST00000486139 332 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC104057.1-201ENST00000515547 497 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC105036.1-201ENST00000566222 271 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC012414.6-201ENST00000568241 401 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 HMGN2P15-201ENST00000585707 270 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 HMGN1P30-201ENST00000589286 268 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 MTCO2P22-201ENST00000603246 681 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 HSBP1P2-201ENST00000299671 229 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 RNU6-1155P-201ENST00000363554 107 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 SNORD51-201ENST00000384320 80 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 SNORA8-201ENST00000384574 139 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC245047.4-201ENST00000433189 144 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AL714022.1-201ENST00000439897 151 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 DYNLT3P2-201ENST00000442517 295 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC116337.2-201ENST00000477662 156 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC034114.1-201ENST00000520293 285 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 RRN3P3-201ENST00000549207 578 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 HSPE1P19-201ENST00000603327 295 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC090116.1-201ENST00000615679 446 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 MIR6130-201ENST00000619419 109 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 AC068057.2-201ENST00000624047 895 ntBASIC0.41□□□□□ -2.34
CSPG4Q6UVK1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 MIR515-2-201ENST00000384883 83 ntBASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 MIR515-1-201ENST00000384884 83 ntBASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 RPS24P7-201ENST00000416921 246 ntBASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 RPL7P29-201ENST00000437151 728 ntBASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 AC022447.1-201ENST00000515358 464 ntBASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 AL078604.3-201ENST00000615580 211 ntBASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
CSPG4Q6UVK1 SNORA9.1-201ENST00000362412 131 ntBASIC0.39□□□□□ -2.35
CSPG4Q6UVK1 RNU6-1164P-201ENST00000364428 107 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms