Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 RPS26P21-201ENST00000475397 348 ntBASIC5.25□□□□□ -1.57
RNF20Q5VTR2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 SEPT14P8-201ENST00000508026 178 ntBASIC5.25□□□□□ -1.57
RNF20Q5VTR2 RNA5SP154-201ENST00000516193 111 ntBASIC5.25□□□□□ -1.57
RNF20Q5VTR2 SNORA31.19-201ENST00000517079 126 ntBASIC5.25□□□□□ -1.57
RNF20Q5VTR2 AC069240.1-201ENST00000548774 375 ntBASIC5.25□□□□□ -1.57
RNF20Q5VTR2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 AC079587.1-201ENST00000603846 277 ntBASIC5.25□□□□□ -1.57
RNF20Q5VTR2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 RAD17P1-201ENST00000418130 2042 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 Y_RNA.44-201ENST00000362676 108 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 RNU4-90P-201ENST00000362773 141 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 RNU6-336P-201ENST00000364891 107 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 RNU6-47P-201ENST00000383866 107 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 RNA5SP104-201ENST00000410989 118 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 AC007919.1-201ENST00000429380 217 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 AC109925.1-201ENST00000478069 331 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 AC015795.1-201ENST00000513669 327 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 RNU6-1256P-201ENST00000516539 103 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 RNA5SP290-201ENST00000517133 127 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 MIR548AI-201ENST00000579940 88 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 AC007448.1-201ENST00000582714 234 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 AC060766.3-201ENST00000591442 263 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 AC234771.5-201ENST00000600161 514 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 AC006065.5-201ENST00000623427 349 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 AL359854.1-201ENST00000614203 1594 ntBASIC5.24□□□□□ -1.57
RNF20Q5VTR2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RNF20Q5VTR2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 RNU1-15P-201ENST00000353977 144 ntBASIC5.23□□□□□ -1.57
RNF20Q5VTR2 RNU5E-7P-201ENST00000365290 117 ntBASIC5.23□□□□□ -1.57
RNF20Q5VTR2 RNA5SP235-201ENST00000365411 114 ntBASIC5.23□□□□□ -1.57
RNF20Q5VTR2 RNU6-629P-201ENST00000384061 103 ntBASIC5.23□□□□□ -1.57
RNF20Q5VTR2 MIR34A-201ENST00000385130 110 ntBASIC5.23□□□□□ -1.57
RNF20Q5VTR2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 MIR1911-201ENST00000410783 80 ntBASIC5.23□□□□□ -1.57
RNF20Q5VTR2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 RPL21P126-201ENST00000470049 478 ntBASIC5.23□□□□□ -1.57
RNF20Q5VTR2 AL160314.1-201ENST00000490836 438 ntBASIC5.23□□□□□ -1.57
RNF20Q5VTR2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 AL645944.1-201ENST00000603857 493 ntBASIC5.23□□□□□ -1.57
RNF20Q5VTR2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 MIR6715B-201ENST00000637172 77 ntBASIC5.23□□□□□ -1.57
RNF20Q5VTR2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
RNF20Q5VTR2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RNF20Q5VTR2 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF20Q5VTR2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RNF20Q5VTR2 Y_RNA.122-201ENST00000363331 96 ntBASIC5.22□□□□□ -1.57
RNF20Q5VTR2 Y_RNA.170-201ENST00000363746 110 ntBASIC5.22□□□□□ -1.57
RNF20Q5VTR2 MIR129-1-201ENST00000384972 72 ntBASIC5.22□□□□□ -1.57
RNF20Q5VTR2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.22□□□□□ -1.57
RNF20Q5VTR2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF20Q5VTR2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF20Q5VTR2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF20Q5VTR2 snoU13.30-201ENST00000458951 104 ntBASIC5.22□□□□□ -1.57
RNF20Q5VTR2 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.22□□□□□ -1.57
RNF20Q5VTR2 SNORD116-28-201ENST00000516123 91 ntBASIC5.22□□□□□ -1.57
RNF20Q5VTR2 RNU6-346P-201ENST00000516288 111 ntBASIC5.22□□□□□ -1.57
RNF20Q5VTR2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.22□□□□□ -1.57
RNF20Q5VTR2 AP006245.1-201ENST00000522549 120 ntBASIC5.22□□□□□ -1.57
RNF20Q5VTR2 MRPS36P4-201ENST00000534436 298 ntBASIC5.22□□□□□ -1.57
RNF20Q5VTR2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF20Q5VTR2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF20Q5VTR2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF20Q5VTR2 Z83818.1-201ENST00000603584 150 ntBASIC5.22□□□□□ -1.57
RNF20Q5VTR2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF20Q5VTR2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms