Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC099654.5-201ENST00000636479 350 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 AL049737.1-201ENST00000413920 1403 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.34□□□□□ -2.35
PRKDCP78527 MTCO3P12-201ENST00000416718 547 ntBASIC0.34□□□□□ -2.35
PRKDCP78527 MTND6P13-201ENST00000443510 523 ntBASIC0.34□□□□□ -2.35
PRKDCP78527 PRELID3BP1-201ENST00000457142 540 ntBASIC0.34□□□□□ -2.35
PRKDCP78527 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.34□□□□□ -2.35
PRKDCP78527 AC013244.3-201ENST00000605614 388 ntBASIC0.34□□□□□ -2.35
PRKDCP78527 AL356473.1-201ENST00000406203 1408 ntBASIC0.34□□□□□ -2.35
PRKDCP78527 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
PRKDCP78527 MIR515-2-201ENST00000384883 83 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 MIR515-1-201ENST00000384884 83 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 RNA5SP212-201ENST00000391223 107 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 AL139098.1-201ENST00000407291 389 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 AC009310.1-201ENST00000414414 451 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 AC092393.1-201ENST00000439625 742 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.34□□□□□ -2.36
PRKDCP78527 AL359385.1-201ENST00000456509 365 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 PNPLA4P1-201ENST00000458328 305 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 RPL22P13-201ENST00000493291 347 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.34□□□□□ -2.36
PRKDCP78527 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.34□□□□□ -2.36
PRKDCP78527 MIR4713-201ENST00000582691 75 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 ELOCP5-201ENST00000604924 333 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 Y_RNA.62-201ENST00000362840 99 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.34□□□□□ -2.36
PRKDCP78527 AC104629.2-201ENST00000468627 598 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.34□□□□□ -2.36
PRKDCP78527 RNA5SP112-201ENST00000515937 99 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 AL160236.1-201ENST00000556317 195 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
PRKDCP78527 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.33□□□□□ -2.36
PRKDCP78527 SNORA4.3-201ENST00000365564 137 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.33□□□□□ -2.36
PRKDCP78527 HMGB1P35-201ENST00000503360 598 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.33□□□□□ -2.36
PRKDCP78527 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.33□□□□□ -2.36
PRKDCP78527 AL391516.1-201ENST00000554380 2449 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 SNORA8.3-201ENST00000384679 139 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.33□□□□□ -2.36
PRKDCP78527 RNU6-362P-201ENST00000516736 90 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.33□□□□□ -2.36
PRKDCP78527 AC104763.3-201ENST00000613765 618 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 HSBP1P2-201ENST00000299671 229 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 Y_RNA.457-201ENST00000384237 111 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 OR9R1P-201ENST00000412200 877 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 AL158823.1-201ENST00000418441 478 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 NCOR1P3-201ENST00000420479 303 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.33□□□□□ -2.36
PRKDCP78527 AL606489.2-201ENST00000433886 234 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.33□□□□□ -2.36
PRKDCP78527 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.33□□□□□ -2.36
PRKDCP78527 AC009974.1-201ENST00000608881 455 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 AC008498.1-201ENST00000613012 531 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 AP002791.1-201ENST00000623291 381 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 AC091925.2-201ENST00000625059 256 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 AC110491.1-201ENST00000562191 2010 ntBASIC0.33□□□□□ -2.36
PRKDCP78527 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.32□□□□□ -2.36
PRKDCP78527 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.32□□□□□ -2.36
PRKDCP78527 RNU6-821P-201ENST00000390995 107 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.32□□□□□ -2.36
PRKDCP78527 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.32□□□□□ -2.36
PRKDCP78527 SNRPEP7-201ENST00000438350 220 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 AL590365.1-201ENST00000450788 243 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.32□□□□□ -2.36
PRKDCP78527 AF213884.2-201ENST00000510417 903 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 RNU4-57P-201ENST00000515980 135 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 AL359212.1-201ENST00000556608 614 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 HSPE1P19-201ENST00000603327 295 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 AC106900.2-201ENST00000604994 317 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.32□□□□□ -2.36
PRKDCP78527 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
PRKDCP78527 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 RNU11-3P-201ENST00000391111 133 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 MRPL35P3-201ENST00000421557 364 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.32□□□□□ -2.36
PRKDCP78527 MICF-203ENST00000432679 129 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 RPS25P9-201ENST00000435591 252 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 MTND2P19-201ENST00000449129 1012 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.32□□□□□ -2.36
PRKDCP78527 AC008562.1-201ENST00000521763 330 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.32□□□□□ -2.36
PRKDCP78527 RNU6-1293P-201ENST00000384077 107 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 MIR618-201ENST00000385287 98 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 AC079140.2-201ENST00000506193 142 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 SNRPGP17-201ENST00000603780 214 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 RNU6-156P-201ENST00000621869 107 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 RNU6-733P-201ENST00000410759 104 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 ZNF863P-201ENST00000426746 417 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 TOMM22P2-201ENST00000430735 237 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 AL358794.1-201ENST00000445689 381 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 AC067940.1-201ENST00000458411 300 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 AC107626.1-201ENST00000471084 183 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 OR2A41P-201ENST00000473586 105 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 TRBVB-201ENST00000477100 408 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.32□□□□□ -2.36
PRKDCP78527 AL049870.4-201ENST00000555741 486 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 AC012435.1-202ENST00000568772 240 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms