Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
FOXG1P55316 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
FOXG1P55316 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXG1P55316 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
FOXG1P55316 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXG1P55316 NCAPGP1-201ENST00000505112 1814 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 MTND5P27-201ENST00000428871 1720 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
FOXG1P55316 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
FOXG1P55316 RNU6-266P-201ENST00000364225 107 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 RNU1-115P-201ENST00000365329 160 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 RNU6-701P-201ENST00000384059 107 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 RNU6-209P-201ENST00000384118 107 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 SNORD51-201ENST00000384320 80 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
FOXG1P55316 Z98941.1-201ENST00000407764 100 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 RNU2-23P-201ENST00000410545 195 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 RNU2-37P-201ENST00000410695 177 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 RNA5SP111-201ENST00000411386 101 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 RPL21P24-201ENST00000413752 448 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 Z99755.1-201ENST00000414048 380 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 AC017079.2-201ENST00000416102 485 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 UBE2FP1-201ENST00000416536 447 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXG1P55316 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXG1P55316 USMG5P1-201ENST00000425964 177 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXG1P55316 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.17□□□□□ -1.9
FOXG1P55316 HMGN2P31-201ENST00000432430 273 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXG1P55316 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXG1P55316 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXG1P55316 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXG1P55316 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
FOXG1P55316 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXG1P55316 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXG1P55316 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXG1P55316 AC131281.1-201ENST00000522984 164 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXG1P55316 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXG1P55316 HSBP1P1-201ENST00000555205 166 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXG1P55316 AL138889.2-201ENST00000603883 242 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 AC016727.2-201ENST00000603988 621 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 AC006077.1-201ENST00000604746 343 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 SNORA51-201ENST00000606420 132 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXG1P55316 AC006329.2-201ENST00000611491 394 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
FOXG1P55316 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
FOXG1P55316 AC032011.1-201ENST00000611703 1549 ntBASIC3.17□□□□□ -1.9
FOXG1P55316 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXG1P55316 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXG1P55316 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
FOXG1P55316 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXG1P55316 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXG1P55316 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXG1P55316 AP001148.1-201ENST00000624124 2359 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
FOXG1P55316 MIR423-201ENST00000362201 94 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 RNU6-874P-201ENST00000362390 105 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 Y_RNA.210-201ENST00000364161 110 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 RNU6-715P-201ENST00000365204 103 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 Y_RNA.399-201ENST00000383955 105 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 RNU6-128P-201ENST00000383976 107 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 Y_RNA.424-201ENST00000384063 103 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXG1P55316 RPS4XP7-201ENST00000406274 780 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXG1P55316 AL356968.1-201ENST00000416622 474 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 AC244098.2-201ENST00000422068 99 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXG1P55316 CALM2P2-201ENST00000428512 440 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXG1P55316 RPS15AP10-201ENST00000432472 382 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 RPL35AP22-201ENST00000436855 335 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 AC007967.1-201ENST00000455422 1159 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXG1P55316 SNORD5.1-201ENST00000458800 75 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 RNU7-167P-201ENST00000459160 62 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 RN7SL93P-201ENST00000463035 293 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 AC114801.2-201ENST00000503825 781 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXG1P55316 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXG1P55316 RNU6-408P-201ENST00000515910 100 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 RNU2-69P-201ENST00000516061 100 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 RN7SKP83-201ENST00000516512 178 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 IGKV2D-19-201ENST00000523346 262 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.16□□□□□ -1.9
FOXG1P55316 AP004242.1-201ENST00000533701 349 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 AC026371.1-201ENST00000551867 419 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXG1P55316 AL360157.1-201ENST00000565962 87 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXG1P55316 MIR5047-201ENST00000579212 100 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.16□□□□□ -1.9
FOXG1P55316 AC078899.3-201ENST00000599065 212 ntBASIC3.16□□□□□ -1.9
FOXG1P55316 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXG1P55316 MIR92B-201ENST00000607575 96 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms