Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC005019.1-201ENST00000436455 431 ntBASIC3.06□□□□□ -1.92
CDH12P55289 SNRPEP9-201ENST00000436794 238 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH12P55289 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.06□□□□□ -1.92
CDH12P55289 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH12P55289 MTND4P29-201ENST00000503122 1372 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH12P55289 AC008716.1-201ENST00000511084 513 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AC010265.1-201ENST00000513509 211 ntBASIC3.06□□□□□ -1.92
CDH12P55289 RNU6-277P-201ENST00000516272 106 ntBASIC3.06□□□□□ -1.92
CDH12P55289 Y_RNA.691-201ENST00000516611 103 ntBASIC3.06□□□□□ -1.92
CDH12P55289 RNU6-1282P-201ENST00000516735 96 ntBASIC3.06□□□□□ -1.92
CDH12P55289 RNU6-256P-201ENST00000516747 97 ntBASIC3.06□□□□□ -1.92
CDH12P55289 RNU6-273P-201ENST00000516937 96 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH12P55289 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.06□□□□□ -1.92
CDH12P55289 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDH12P55289 AP000889.2-201ENST00000532684 490 ntBASIC3.06□□□□□ -1.92
CDH12P55289 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH12P55289 AC011611.1-201ENST00000552179 197 ntBASIC3.06□□□□□ -1.92
CDH12P55289 TRAV37-201ENST00000553906 342 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AC005476.1-201ENST00000554427 397 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AC005668.1-201ENST00000571142 476 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH12P55289 LRRC37A5P-203ENST00000580181 585 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AC243960.4-201ENST00000600532 288 ntBASIC3.06□□□□□ -1.92
CDH12P55289 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH12P55289 AC007938.3-201ENST00000604965 623 ntBASIC3.06□□□□□ -1.92
CDH12P55289 uc_338.1-201ENST00000612113 180 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AL031601.2-202ENST00000622650 282 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AC022140.2-201ENST00000623500 188 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AL356274.2-201ENST00000624379 3752 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AL034408.1-202ENST00000636088 415 ntBASIC3.06□□□□□ -1.92
CDH12P55289 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH12P55289 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDH12P55289 AC118273.1-201ENST00000525324 3006 ntBASIC3.06□□□□□ -1.92
CDH12P55289 AL359693.1-201ENST00000614959 2407 ntBASIC3.05□□□□□ -1.92
CDH12P55289 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH12P55289 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDH12P55289 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.05□□□□□ -1.92
CDH12P55289 RNU6-694P-201ENST00000364071 147 ntBASIC3.05□□□□□ -1.92
CDH12P55289 RNU6-266P-201ENST00000364225 107 ntBASIC3.05□□□□□ -1.92
CDH12P55289 RNU1-64P-201ENST00000365443 163 ntBASIC3.05□□□□□ -1.92
CDH12P55289 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDH12P55289 RNU6-217P-201ENST00000384164 104 ntBASIC3.05□□□□□ -1.92
CDH12P55289 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH12P55289 AC018644.1-201ENST00000429934 551 ntBASIC3.05□□□□□ -1.92
CDH12P55289 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH12P55289 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH12P55289 RPL21P23-201ENST00000446654 460 ntBASIC3.05□□□□□ -1.92
CDH12P55289 RPL12P25-201ENST00000455592 494 ntBASIC3.05□□□□□ -1.92
CDH12P55289 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH12P55289 RNA5SP310-201ENST00000459084 116 ntBASIC3.05□□□□□ -1.92
CDH12P55289 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH12P55289 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH12P55289 RNU1-45P-201ENST00000517191 141 ntBASIC3.05□□□□□ -1.92
CDH12P55289 AC245166.1-201ENST00000521012 253 ntBASIC3.05□□□□□ -1.92
CDH12P55289 AC025755.1-201ENST00000521306 278 ntBASIC3.05□□□□□ -1.92
CDH12P55289 AC093027.1-201ENST00000546698 429 ntBASIC3.05□□□□□ -1.92
CDH12P55289 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH12P55289 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH12P55289 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.05□□□□□ -1.92
CDH12P55289 MIR3941-201ENST00000582572 103 ntBASIC3.05□□□□□ -1.92
CDH12P55289 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.05□□□□□ -1.92
CDH12P55289 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH12P55289 AC039056.2-201ENST00000622261 511 ntBASIC3.05□□□□□ -1.92
CDH12P55289 CR392039.5-201ENST00000623201 510 ntBASIC3.05□□□□□ -1.92
CDH12P55289 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH12P55289 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
CDH12P55289 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH12P55289 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDH12P55289 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CDH12P55289 AL079305.1-201ENST00000623159 3008 ntBASIC3.04□□□□□ -1.92
CDH12P55289 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.04□□□□□ -1.92
CDH12P55289 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDH12P55289 RNU1-70P-201ENST00000362618 164 ntBASIC3.04□□□□□ -1.92
CDH12P55289 RNU6-384P-201ENST00000364900 104 ntBASIC3.04□□□□□ -1.92
CDH12P55289 Y_RNA.474-201ENST00000384341 102 ntBASIC3.04□□□□□ -1.92
CDH12P55289 MIR450B-201ENST00000401182 78 ntBASIC3.04□□□□□ -1.92
CDH12P55289 RNU2-68P-201ENST00000410878 191 ntBASIC3.04□□□□□ -1.92
CDH12P55289 AL592148.1-201ENST00000413568 445 ntBASIC3.04□□□□□ -1.92
CDH12P55289 VN1R36P-201ENST00000414936 291 ntBASIC3.04□□□□□ -1.92
CDH12P55289 RPL7P10-201ENST00000417407 739 ntBASIC3.04□□□□□ -1.92
CDH12P55289 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH12P55289 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH12P55289 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH12P55289 AL133547.1-201ENST00000448546 220 ntBASIC3.04□□□□□ -1.92
CDH12P55289 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH12P55289 TRBVA-201ENST00000498804 316 ntBASIC3.04□□□□□ -1.92
CDH12P55289 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH12P55289 CYCSP27-201ENST00000527643 293 ntBASIC3.04□□□□□ -1.92
CDH12P55289 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH12P55289 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH12P55289 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH12P55289 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH12P55289 MIR4795-201ENST00000584182 89 ntBASIC3.04□□□□□ -1.92
CDH12P55289 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH12P55289 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH12P55289 AL022345.1-201ENST00000607292 135 ntBASIC3.04□□□□□ -1.92
CDH12P55289 FTX_3.1-201ENST00000610451 147 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms