Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MIR4293-201ENST00000584305 78 ntBASIC1.64□□□□□ -2.15
RPA3P35244 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.64□□□□□ -2.15
RPA3P35244 AL109918.3-201ENST00000603072 338 ntBASIC1.64□□□□□ -2.15
RPA3P35244 AC034229.4-201ENST00000607861 441 ntBASIC1.64□□□□□ -2.15
RPA3P35244 AC009974.1-201ENST00000608881 455 ntBASIC1.64□□□□□ -2.15
RPA3P35244 AC245297.2-201ENST00000610119 565 ntBASIC1.64□□□□□ -2.15
RPA3P35244 AP003476.1-201ENST00000623984 516 ntBASIC1.64□□□□□ -2.15
RPA3P35244 AC099654.9-201ENST00000637055 678 ntBASIC1.64□□□□□ -2.15
RPA3P35244 LINC02211-204ENST00000642024 1070 ntBASIC1.64□□□□□ -2.15
RPA3P35244 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RPA3P35244 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.63□□□□□ -2.15
RPA3P35244 RNU6-1280P-201ENST00000365211 107 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AC119751.3-201ENST00000399720 670 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AL591034.2-201ENST00000402839 359 ntBASIC1.63□□□□□ -2.15
RPA3P35244 RNA5SP450-201ENST00000411206 102 ntBASIC1.63□□□□□ -2.15
RPA3P35244 HMGB1P27-201ENST00000431429 603 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.63□□□□□ -2.15
RPA3P35244 RPS25P9-201ENST00000435591 252 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AL353706.1-201ENST00000436728 494 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.63□□□□□ -2.15
RPA3P35244 FDX1P2-201ENST00000450769 375 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.63□□□□□ -2.15
RPA3P35244 HMGB1P35-201ENST00000503360 598 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.63□□□□□ -2.15
RPA3P35244 AC117522.2-201ENST00000510049 657 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.63□□□□□ -2.15
RPA3P35244 RNU6-678P-201ENST00000516832 109 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AC084851.1-201ENST00000529105 249 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.63□□□□□ -2.15
RPA3P35244 MTND4LP25-201ENST00000570218 163 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.63□□□□□ -2.15
RPA3P35244 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.63□□□□□ -2.15
RPA3P35244 BNIP3P27-201ENST00000599991 412 ntBASIC1.63□□□□□ -2.15
RPA3P35244 MIR6134-201ENST00000617606 109 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AC109809.1-201ENST00000619665 545 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AC013470.4-201ENST00000619978 986 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.63□□□□□ -2.15
RPA3P35244 AC241585.2-209ENST00000638217 143 ntBASIC1.63□□□□□ -2.15
RPA3P35244 CDC27P3-201ENST00000635418 1910 ntBASIC1.63□□□□□ -2.15
RPA3P35244 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RPA3P35244 SNORA25B-201ENST00000365507 128 ntBASIC1.62□□□□□ -2.15
RPA3P35244 SNORD116-12-201ENST00000384468 92 ntBASIC1.62□□□□□ -2.15
RPA3P35244 AC078974.1-201ENST00000411597 223 ntBASIC1.62□□□□□ -2.15
RPA3P35244 AL353621.1-201ENST00000418219 243 ntBASIC1.62□□□□□ -2.15
RPA3P35244 CYCSP49-201ENST00000420810 319 ntBASIC1.62□□□□□ -2.15
RPA3P35244 PGBD4P6-201ENST00000421501 610 ntBASIC1.62□□□□□ -2.15
RPA3P35244 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.62□□□□□ -2.15
RPA3P35244 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.62□□□□□ -2.15
RPA3P35244 RPL7P34-201ENST00000433316 712 ntBASIC1.62□□□□□ -2.15
RPA3P35244 RSU1P2-202ENST00000437884 485 ntBASIC1.62□□□□□ -2.15
RPA3P35244 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.62□□□□□ -2.15
RPA3P35244 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RPA3P35244 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.62□□□□□ -2.15
RPA3P35244 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.62□□□□□ -2.15
RPA3P35244 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.62□□□□□ -2.15
RPA3P35244 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.62□□□□□ -2.15
RPA3P35244 AC108729.1-201ENST00000487812 947 ntBASIC1.62□□□□□ -2.15
RPA3P35244 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RPA3P35244 AC079395.1-201ENST00000510981 262 ntBASIC1.62□□□□□ -2.15
RPA3P35244 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.62□□□□□ -2.15
RPA3P35244 DEFB122-202ENST00000569013 197 ntBASIC1.62□□□□□ -2.15
RPA3P35244 AL606834.3-201ENST00000602615 496 ntBASIC1.62□□□□□ -2.15
RPA3P35244 AL713866.2-201ENST00000603579 219 ntBASIC1.62□□□□□ -2.15
RPA3P35244 MIR7843-201ENST00000622274 79 ntBASIC1.62□□□□□ -2.15
RPA3P35244 AC138627.2-201ENST00000624202 601 ntBASIC1.62□□□□□ -2.15
RPA3P35244 AC091932.3-201ENST00000624223 323 ntBASIC1.62□□□□□ -2.15
RPA3P35244 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPA3P35244 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPA3P35244 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.62□□□□□ -2.15
RPA3P35244 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
RPA3P35244 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.61□□□□□ -2.15
RPA3P35244 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RPA3P35244 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RPA3P35244 RNU6-898P-201ENST00000365627 104 ntBASIC1.61□□□□□ -2.15
RPA3P35244 RNU6-413P-201ENST00000384115 107 ntBASIC1.61□□□□□ -2.15
RPA3P35244 RNU6-14P-201ENST00000384630 106 ntBASIC1.61□□□□□ -2.15
RPA3P35244 MIR95-201ENST00000385072 81 ntBASIC1.61□□□□□ -2.15
RPA3P35244 MIR1302-8-201ENST00000408342 128 ntBASIC1.61□□□□□ -2.15
RPA3P35244 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.61□□□□□ -2.15
RPA3P35244 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.61□□□□□ -2.15
RPA3P35244 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.61□□□□□ -2.15
RPA3P35244 TOMM20P4-201ENST00000427861 435 ntBASIC1.61□□□□□ -2.15
RPA3P35244 AL592045.1-201ENST00000429867 352 ntBASIC1.61□□□□□ -2.15
RPA3P35244 AL591806.2-201ENST00000433122 173 ntBASIC1.61□□□□□ -2.15
RPA3P35244 DNAJC19P4-201ENST00000440115 345 ntBASIC1.61□□□□□ -2.15
RPA3P35244 MTCO1P53-201ENST00000441633 699 ntBASIC1.61□□□□□ -2.15
RPA3P35244 MTND6P13-201ENST00000443510 523 ntBASIC1.61□□□□□ -2.15
RPA3P35244 USP9YP10-201ENST00000454868 628 ntBASIC1.61□□□□□ -2.15
RPA3P35244 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.61□□□□□ -2.15
RPA3P35244 AC018868.1-201ENST00000491307 315 ntBASIC1.61□□□□□ -2.15
RPA3P35244 AC104629.1-201ENST00000494226 508 ntBASIC1.61□□□□□ -2.15
RPA3P35244 AC016550.1-201ENST00000505348 785 ntBASIC1.61□□□□□ -2.15
RPA3P35244 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.61□□□□□ -2.15
RPA3P35244 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RPA3P35244 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.61□□□□□ -2.15
RPA3P35244 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.61□□□□□ -2.15
RPA3P35244 AP006587.4-201ENST00000526053 529 ntBASIC1.61□□□□□ -2.15
RPA3P35244 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.61□□□□□ -2.15
RPA3P35244 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.61□□□□□ -2.15
RPA3P35244 AC243960.4-201ENST00000600532 288 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 293.9 ms