Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.69□□□□□ -1.82
POLR2AP24928 RPL17P19-201ENST00000489069 552 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 AC069499.1-201ENST00000489433 509 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 RNU6-1038P-201ENST00000516516 104 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 Y_RNA.689-201ENST00000516589 107 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 AP005902.1-201ENST00000521358 186 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
POLR2AP24928 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.69□□□□□ -1.82
POLR2AP24928 MIR5692C1-201ENST00000585309 91 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 ELOCP29-201ENST00000588193 334 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 MIR4496-201ENST00000635896 61 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
POLR2AP24928 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.69□□□□□ -1.82
POLR2AP24928 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
POLR2AP24928 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.69□□□□□ -1.82
POLR2AP24928 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.69□□□□□ -1.82
POLR2AP24928 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
POLR2AP24928 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
POLR2AP24928 CEP170P1-201ENST00000502249 4587 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 UBE2L2-201ENST00000254302 429 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 AC073325.2-201ENST00000339545 159 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 RNU6-128P-201ENST00000383976 107 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 Y_RNA.452-201ENST00000384202 108 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 RNU6-1127P-201ENST00000384580 107 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 MIR548F4-201ENST00000408515 105 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 RNA5SP107-201ENST00000411358 122 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 RNA5SP111-201ENST00000411386 101 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 AC080125.1-201ENST00000414888 684 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 AC099677.1-201ENST00000420575 175 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 AL139281.1-201ENST00000422120 335 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.69□□□□□ -1.82
POLR2AP24928 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 SNRPEP4-201ENST00000435815 279 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.69□□□□□ -1.82
POLR2AP24928 AC104472.2-201ENST00000469035 601 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 AC117503.1-201ENST00000472241 394 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 RPL30P11-201ENST00000495304 339 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
POLR2AP24928 AC023157.2-201ENST00000540596 141 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 MIR4790-201ENST00000577799 79 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 AC005899.2-201ENST00000584353 90 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 AL355812.1-201ENST00000603215 216 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 AC136601.2-201ENST00000604356 474 ntBASIC3.69□□□□□ -1.82
POLR2AP24928 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.69□□□□□ -1.82
POLR2AP24928 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
POLR2AP24928 EXOC5P1-201ENST00000510543 1969 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.68□□□□□ -1.82
POLR2AP24928 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
POLR2AP24928 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
POLR2AP24928 FAM35BP-202ENST00000497389 3337 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 AC090971.4-201ENST00000560291 1800 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 RNU6-1115P-201ENST00000362490 106 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 Y_RNA.152-201ENST00000363578 100 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 Y_RNA.234-201ENST00000364409 97 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 RNU6-1318P-201ENST00000365389 103 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 Y_RNA.463-201ENST00000384271 102 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 RNU6-14P-201ENST00000384630 106 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.68□□□□□ -1.82
POLR2AP24928 HIGD1AP11-201ENST00000438361 280 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 AC133473.1-201ENST00000455173 299 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 RPL7P47-201ENST00000497299 556 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 RNU6-988P-201ENST00000519081 107 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 AC109329.2-201ENST00000519658 482 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 AC006600.1-201ENST00000572529 153 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 MIR4504-201ENST00000577413 92 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.68□□□□□ -1.82
POLR2AP24928 COX6CP3-201ENST00000580869 223 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.68□□□□□ -1.82
POLR2AP24928 AP000787.2-201ENST00000604432 568 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 AC018462.2-201ENST00000605375 395 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 AC004696.1-201ENST00000614345 607 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 SDR42E1P2-201ENST00000614861 481 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 MIR6128-201ENST00000615528 109 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.68□□□□□ -1.82
POLR2AP24928 SDR42E1P4-201ENST00000620894 481 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 DDX10P1-201ENST00000448545 1933 ntBASIC3.68□□□□□ -1.82
POLR2AP24928 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
POLR2AP24928 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
POLR2AP24928 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
POLR2AP24928 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
POLR2AP24928 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.67□□□□□ -1.82
POLR2AP24928 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.67□□□□□ -1.82
POLR2AP24928 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
POLR2AP24928 RNU2-3P-201ENST00000410144 191 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 Y_RNA.646-201ENST00000410980 101 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.67□□□□□ -1.82
POLR2AP24928 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.67□□□□□ -1.82
POLR2AP24928 HMGB1P12-201ENST00000438594 598 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 AC011816.1-201ENST00000441346 546 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 AC104058.1-201ENST00000448028 297 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.67□□□□□ -1.82
POLR2AP24928 AP003122.3-201ENST00000526316 255 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 AC109635.4-202ENST00000531666 412 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 AL360157.1-201ENST00000565962 87 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 AC007619.2-201ENST00000605743 379 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.67□□□□□ -1.82
POLR2AP24928 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
POLR2AP24928 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
POLR2AP24928 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
POLR2AP24928 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms