Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MIR199A2-201ENST00000385289 110 ntBASIC3.28□□□□□ -1.88
TNFSF4P23510 AL122016.1-201ENST00000403365 367 ntBASIC3.28□□□□□ -1.88
TNFSF4P23510 MTCO3P46-201ENST00000425787 232 ntBASIC3.28□□□□□ -1.88
TNFSF4P23510 AC093151.1-201ENST00000427711 313 ntBASIC3.28□□□□□ -1.88
TNFSF4P23510 AC097713.2-201ENST00000430199 356 ntBASIC3.28□□□□□ -1.88
TNFSF4P23510 RPS29P7-201ENST00000439662 171 ntBASIC3.28□□□□□ -1.88
TNFSF4P23510 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFSF4P23510 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFSF4P23510 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFSF4P23510 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TNFSF4P23510 SEM1P1-201ENST00000506694 209 ntBASIC3.28□□□□□ -1.88
TNFSF4P23510 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.28□□□□□ -1.88
TNFSF4P23510 RNU5F-8P-201ENST00000515941 111 ntBASIC3.28□□□□□ -1.88
TNFSF4P23510 RNU6-377P-201ENST00000515965 102 ntBASIC3.28□□□□□ -1.88
TNFSF4P23510 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFSF4P23510 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.28□□□□□ -1.88
TNFSF4P23510 FAM157A-202ENST00000615155 405 ntBASIC3.28□□□□□ -1.88
TNFSF4P23510 SNORA50A-202ENST00000629536 136 ntBASIC3.28□□□□□ -1.88
TNFSF4P23510 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
TNFSF4P23510 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TNFSF4P23510 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.28□□□□□ -1.88
TNFSF4P23510 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
TNFSF4P23510 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.28□□□□□ -1.88
TNFSF4P23510 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TNFSF4P23510 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TNFSF4P23510 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TNFSF4P23510 CBX3P1-201ENST00000325243 554 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.27□□□□□ -1.89
TNFSF4P23510 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFSF4P23510 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
TNFSF4P23510 RNU6-767P-201ENST00000384132 107 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 SNORD116-20-201ENST00000384529 92 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TNFSF4P23510 RN7SKP202-201ENST00000410439 330 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 RNU6-1148P-201ENST00000410992 104 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.27□□□□□ -1.89
TNFSF4P23510 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.27□□□□□ -1.89
TNFSF4P23510 RPL35AP12-201ENST00000425362 338 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 ATP5HP2-201ENST00000433885 485 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 VN1R34P-201ENST00000447387 883 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFSF4P23510 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.27□□□□□ -1.89
TNFSF4P23510 RPL31P41-201ENST00000477967 372 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 AC069499.1-201ENST00000489433 509 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 MRPS36P2-201ENST00000512569 299 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 AC046134.1-201ENST00000514454 666 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.27□□□□□ -1.89
TNFSF4P23510 AC022695.1-201ENST00000522089 237 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 AC107953.1-201ENST00000522216 297 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.27□□□□□ -1.89
TNFSF4P23510 AC025423.5-201ENST00000550230 219 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.27□□□□□ -1.89
TNFSF4P23510 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFSF4P23510 MIR548S-201ENST00000581352 82 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 AC100830.2-201ENST00000581636 240 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 AL022345.1-201ENST00000607292 135 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 uc_338.14-201ENST00000613162 166 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.27□□□□□ -1.89
TNFSF4P23510 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TNFSF4P23510 AL079305.1-201ENST00000623159 3008 ntBASIC3.27□□□□□ -1.89
TNFSF4P23510 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TNFSF4P23510 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TNFSF4P23510 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TNFSF4P23510 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.26□□□□□ -1.89
TNFSF4P23510 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
TNFSF4P23510 MIR30B-201ENST00000384850 88 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 AL512633.1-201ENST00000399931 655 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 HLFP1-201ENST00000402375 499 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 MIR1289-1-201ENST00000408836 144 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 VN1R36P-201ENST00000414936 291 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.26□□□□□ -1.89
TNFSF4P23510 AL117339.3-201ENST00000418733 162 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 ATG3P1-201ENST00000419507 911 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 MTND4LP11-201ENST00000422184 280 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 AC091286.1-201ENST00000431233 461 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 IFNA20P-201ENST00000436840 528 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 MTND4LP16-201ENST00000440828 295 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.26□□□□□ -1.89
TNFSF4P23510 AL500522.2-201ENST00000448562 343 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.26□□□□□ -1.89
TNFSF4P23510 AL031274.1-201ENST00000450334 232 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.26□□□□□ -1.89
TNFSF4P23510 AC008628.2-201ENST00000502605 298 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.26□□□□□ -1.89
TNFSF4P23510 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.26□□□□□ -1.89
TNFSF4P23510 MTCYBP40-201ENST00000509390 1135 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 RNU6-864P-201ENST00000516256 108 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 RNU6-256P-201ENST00000516747 97 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 RNU6-1231P-201ENST00000517185 103 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.26□□□□□ -1.89
TNFSF4P23510 AP005597.4-201ENST00000526762 229 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 AP000889.2-201ENST00000532684 490 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 AC010186.2-204ENST00000537668 439 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.26□□□□□ -1.89
TNFSF4P23510 AC011471.1-201ENST00000585766 187 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 RNU6-91P-201ENST00000607774 107 ntBASIC3.26□□□□□ -1.89
TNFSF4P23510 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
TNFSF4P23510 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.26□□□□□ -1.89
TNFSF4P23510 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TNFSF4P23510 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms