Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.89□□□□□ -1.95
MSH3P20585 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.89□□□□□ -1.95
MSH3P20585 MTND4P25-201ENST00000441039 533 ntBASIC2.89□□□□□ -1.95
MSH3P20585 AC009237.8-201ENST00000445492 379 ntBASIC2.89□□□□□ -1.95
MSH3P20585 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.89□□□□□ -1.95
MSH3P20585 WASF1P1-201ENST00000447560 1131 ntBASIC2.89□□□□□ -1.95
MSH3P20585 RPL39P36-201ENST00000490784 156 ntBASIC2.89□□□□□ -1.95
MSH3P20585 AC116353.2-201ENST00000505332 712 ntBASIC2.89□□□□□ -1.95
MSH3P20585 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.89□□□□□ -1.95
MSH3P20585 PRDX4P1-201ENST00000507189 574 ntBASIC2.89□□□□□ -1.95
MSH3P20585 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
MSH3P20585 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.89□□□□□ -1.95
MSH3P20585 RNA5SP471-201ENST00000516971 106 ntBASIC2.89□□□□□ -1.95
MSH3P20585 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.89□□□□□ -1.95
MSH3P20585 ADI1P3-201ENST00000549509 470 ntBASIC2.89□□□□□ -1.95
MSH3P20585 AL138976.2-201ENST00000563989 694 ntBASIC2.89□□□□□ -1.95
MSH3P20585 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.89□□□□□ -1.95
MSH3P20585 AC012119.1-201ENST00000603184 222 ntBASIC2.89□□□□□ -1.95
MSH3P20585 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.89□□□□□ -1.95
MSH3P20585 AC022893.3-201ENST00000607665 437 ntBASIC2.89□□□□□ -1.95
MSH3P20585 AL020991.1-201ENST00000612314 373 ntBASIC2.89□□□□□ -1.95
MSH3P20585 DISC2.1-201ENST00000612827 205 ntBASIC2.89□□□□□ -1.95
MSH3P20585 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
MSH3P20585 AC091953.5-201ENST00000622919 233 ntBASIC2.89□□□□□ -1.95
MSH3P20585 MTND1P37-201ENST00000636562 264 ntBASIC2.89□□□□□ -1.95
MSH3P20585 AC024614.3-201ENST00000637860 256 ntBASIC2.89□□□□□ -1.95
MSH3P20585 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
MSH3P20585 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
MSH3P20585 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
MSH3P20585 AL354685.2-201ENST00000448218 1447 ntBASIC2.88□□□□□ -1.95
MSH3P20585 UBE2L2-201ENST00000254302 429 ntBASIC2.88□□□□□ -1.95
MSH3P20585 RNU6-552P-201ENST00000362869 119 ntBASIC2.88□□□□□ -1.95
MSH3P20585 RNU6-1287P-201ENST00000362914 107 ntBASIC2.88□□□□□ -1.95
MSH3P20585 SNORA14A-201ENST00000364773 135 ntBASIC2.88□□□□□ -1.95
MSH3P20585 RNU6-1060P-201ENST00000384664 107 ntBASIC2.88□□□□□ -1.95
MSH3P20585 RNU6-1197P-201ENST00000391183 107 ntBASIC2.88□□□□□ -1.95
MSH3P20585 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
MSH3P20585 OR6C66P-201ENST00000414917 930 ntBASIC2.88□□□□□ -1.95
MSH3P20585 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.88□□□□□ -1.95
MSH3P20585 CALM2P2-201ENST00000428512 440 ntBASIC2.88□□□□□ -1.95
MSH3P20585 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.88□□□□□ -1.95
MSH3P20585 AL591212.2-201ENST00000433923 257 ntBASIC2.88□□□□□ -1.95
MSH3P20585 DPPA3P1-201ENST00000448050 469 ntBASIC2.88□□□□□ -1.95
MSH3P20585 RPL31P58-201ENST00000469001 379 ntBASIC2.88□□□□□ -1.95
MSH3P20585 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.88□□□□□ -1.95
MSH3P20585 AC134698.4-201ENST00000523451 826 ntBASIC2.88□□□□□ -1.95
MSH3P20585 SUB1P1-201ENST00000524415 382 ntBASIC2.88□□□□□ -1.95
MSH3P20585 CASP1P1-201ENST00000526345 212 ntBASIC2.88□□□□□ -1.95
MSH3P20585 ATP5F1P5-201ENST00000526403 760 ntBASIC2.88□□□□□ -1.95
MSH3P20585 RANP3-201ENST00000530970 276 ntBASIC2.88□□□□□ -1.95
MSH3P20585 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.88□□□□□ -1.95
MSH3P20585 HIF1AP1-201ENST00000553642 175 ntBASIC2.88□□□□□ -1.95
MSH3P20585 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.88□□□□□ -1.95
MSH3P20585 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.88□□□□□ -1.95
MSH3P20585 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.88□□□□□ -1.95
MSH3P20585 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.88□□□□□ -1.95
MSH3P20585 AC098826.3-201ENST00000603823 466 ntBASIC2.88□□□□□ -1.95
MSH3P20585 AL161798.1-201ENST00000604630 131 ntBASIC2.88□□□□□ -1.95
MSH3P20585 HSPE1P7-201ENST00000604681 321 ntBASIC2.88□□□□□ -1.95
MSH3P20585 AL158032.1-201ENST00000605401 106 ntBASIC2.88□□□□□ -1.95
MSH3P20585 AC005000.2-201ENST00000605468 310 ntBASIC2.88□□□□□ -1.95
MSH3P20585 AC008945.2-201ENST00000606056 604 ntBASIC2.88□□□□□ -1.95
MSH3P20585 AL359547.2-201ENST00000615810 418 ntBASIC2.88□□□□□ -1.95
MSH3P20585 AC027309.3-201ENST00000623419 351 ntBASIC2.88□□□□□ -1.95
MSH3P20585 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.88□□□□□ -1.95
MSH3P20585 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
MSH3P20585 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
MSH3P20585 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.87□□□□□ -1.95
MSH3P20585 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
MSH3P20585 AC093536.2-201ENST00000565257 1406 ntBASIC2.87□□□□□ -1.95
MSH3P20585 RNU6-741P-201ENST00000383889 107 ntBASIC2.87□□□□□ -1.95
MSH3P20585 Y_RNA.390-201ENST00000383932 102 ntBASIC2.87□□□□□ -1.95
MSH3P20585 Y_RNA.534-201ENST00000384599 112 ntBASIC2.87□□□□□ -1.95
MSH3P20585 RNU6-550P-201ENST00000391057 101 ntBASIC2.87□□□□□ -1.95
MSH3P20585 FGF7P8-201ENST00000402994 292 ntBASIC2.87□□□□□ -1.95
MSH3P20585 RNU2-33P-201ENST00000410344 192 ntBASIC2.87□□□□□ -1.95
MSH3P20585 AL451074.5-201ENST00000415894 435 ntBASIC2.87□□□□□ -1.95
MSH3P20585 BTF3L4P3-201ENST00000418879 476 ntBASIC2.87□□□□□ -1.95
MSH3P20585 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.87□□□□□ -1.95
MSH3P20585 AC092573.2-201ENST00000434546 243 ntBASIC2.87□□□□□ -1.95
MSH3P20585 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.87□□□□□ -1.95
MSH3P20585 HMGB1P31-201ENST00000437242 427 ntBASIC2.87□□□□□ -1.95
MSH3P20585 CALM1P1-201ENST00000442082 433 ntBASIC2.87□□□□□ -1.95
MSH3P20585 RPS24P13-201ENST00000442520 397 ntBASIC2.87□□□□□ -1.95
MSH3P20585 RNU7-180P-201ENST00000459240 63 ntBASIC2.87□□□□□ -1.95
MSH3P20585 AL160314.1-201ENST00000490836 438 ntBASIC2.87□□□□□ -1.95
MSH3P20585 RNU6-358P-201ENST00000516564 75 ntBASIC2.87□□□□□ -1.95
MSH3P20585 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.87□□□□□ -1.95
MSH3P20585 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.87□□□□□ -1.95
MSH3P20585 MIR4424-201ENST00000585257 86 ntBASIC2.87□□□□□ -1.95
MSH3P20585 AL451007.1-201ENST00000595491 289 ntBASIC2.87□□□□□ -1.95
MSH3P20585 AC093732.2-201ENST00000607950 274 ntBASIC2.87□□□□□ -1.95
MSH3P20585 RMST_3.1-201ENST00000611651 109 ntBASIC2.87□□□□□ -1.95
MSH3P20585 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MSH3P20585 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
MSH3P20585 TPTE2P4-201ENST00000258589 1605 ntBASIC2.86□□□□□ -1.95
MSH3P20585 AC096644.4-201ENST00000563417 2912 ntBASIC2.86□□□□□ -1.95
MSH3P20585 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.86□□□□□ -1.95
MSH3P20585 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.86□□□□□ -1.95
MSH3P20585 AC007785.2-201ENST00000598627 1916 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms