Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL591516.1-201ENST00000611326 274 ntBASIC3.1□□□□□ -1.91
PCNAP12004 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.1□□□□□ -1.91
PCNAP12004 AC099506.2-201ENST00000623074 221 ntBASIC3.1□□□□□ -1.91
PCNAP12004 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.1□□□□□ -1.91
PCNAP12004 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.1□□□□□ -1.91
PCNAP12004 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.1□□□□□ -1.91
PCNAP12004 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCNAP12004 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PCNAP12004 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PCNAP12004 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCNAP12004 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
PCNAP12004 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCNAP12004 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.09□□□□□ -1.91
PCNAP12004 FAM35BP-202ENST00000497389 3337 ntBASIC3.09□□□□□ -1.91
PCNAP12004 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.09□□□□□ -1.91
PCNAP12004 Y_RNA.33-201ENST00000362591 102 ntBASIC3.09□□□□□ -1.91
PCNAP12004 RNA5SP119-201ENST00000362715 117 ntBASIC3.09□□□□□ -1.91
PCNAP12004 Y_RNA.231-201ENST00000364358 102 ntBASIC3.09□□□□□ -1.91
PCNAP12004 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.09□□□□□ -1.91
PCNAP12004 Y_RNA.378-201ENST00000365652 113 ntBASIC3.09□□□□□ -1.91
PCNAP12004 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.09□□□□□ -1.91
PCNAP12004 MIR514A2-201ENST00000385131 88 ntBASIC3.09□□□□□ -1.91
PCNAP12004 MIR514A3-201ENST00000385132 88 ntBASIC3.09□□□□□ -1.91
PCNAP12004 MIR670-201ENST00000390142 98 ntBASIC3.09□□□□□ -1.91
PCNAP12004 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PCNAP12004 RNU6-332P-201ENST00000391193 108 ntBASIC3.09□□□□□ -1.91
PCNAP12004 RPL21P3-201ENST00000395517 478 ntBASIC3.09□□□□□ -1.91
PCNAP12004 Y_RNA.615-201ENST00000410769 117 ntBASIC3.09□□□□□ -1.91
PCNAP12004 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.09□□□□□ -1.91
PCNAP12004 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.09□□□□□ -1.91
PCNAP12004 AL139281.1-201ENST00000422120 335 ntBASIC3.09□□□□□ -1.91
PCNAP12004 SKA2P1-201ENST00000425592 390 ntBASIC3.09□□□□□ -1.91
PCNAP12004 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.09□□□□□ -1.91
PCNAP12004 AC097713.2-201ENST00000430199 356 ntBASIC3.09□□□□□ -1.91
PCNAP12004 MYL8P-204ENST00000431574 518 ntBASIC3.09□□□□□ -1.91
PCNAP12004 RPL21P2-201ENST00000440049 481 ntBASIC3.09□□□□□ -1.91
PCNAP12004 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PCNAP12004 VN1R34P-201ENST00000447387 883 ntBASIC3.09□□□□□ -1.91
PCNAP12004 RPS29P12-201ENST00000460178 152 ntBASIC3.09□□□□□ -1.91
PCNAP12004 AC146507.2-201ENST00000460608 476 ntBASIC3.09□□□□□ -1.91
PCNAP12004 AC034236.1-201ENST00000469891 373 ntBASIC3.09□□□□□ -1.91
PCNAP12004 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.09□□□□□ -1.91
PCNAP12004 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.09□□□□□ -1.91
PCNAP12004 AC116353.2-201ENST00000505332 712 ntBASIC3.09□□□□□ -1.91
PCNAP12004 MTND3P25-201ENST00000509243 135 ntBASIC3.09□□□□□ -1.91
PCNAP12004 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.09□□□□□ -1.91
PCNAP12004 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.09□□□□□ -1.91
PCNAP12004 MTND4P7-201ENST00000523876 130 ntBASIC3.09□□□□□ -1.91
PCNAP12004 MIR1254-2-201ENST00000579553 63 ntBASIC3.09□□□□□ -1.91
PCNAP12004 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.09□□□□□ -1.91
PCNAP12004 AC012119.1-201ENST00000603184 222 ntBASIC3.09□□□□□ -1.91
PCNAP12004 RNU6-89P-201ENST00000606519 100 ntBASIC3.09□□□□□ -1.91
PCNAP12004 AC012314.7-201ENST00000619693 93 ntBASIC3.09□□□□□ -1.91
PCNAP12004 AC073308.1-201ENST00000623696 305 ntBASIC3.09□□□□□ -1.91
PCNAP12004 U6.105-201ENST00000637379 88 ntBASIC3.09□□□□□ -1.91
PCNAP12004 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PCNAP12004 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCNAP12004 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.08□□□□□ -1.92
PCNAP12004 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
PCNAP12004 AL359693.1-201ENST00000614959 2407 ntBASIC3.08□□□□□ -1.92
PCNAP12004 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCNAP12004 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCNAP12004 U3.6-201ENST00000363622 211 ntBASIC3.08□□□□□ -1.92
PCNAP12004 RNU6-45P-201ENST00000384471 107 ntBASIC3.08□□□□□ -1.92
PCNAP12004 RNU6-393P-201ENST00000384475 107 ntBASIC3.08□□□□□ -1.92
PCNAP12004 RNU6-1179P-201ENST00000384667 107 ntBASIC3.08□□□□□ -1.92
PCNAP12004 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.08□□□□□ -1.92
PCNAP12004 PRSS3P4-201ENST00000453323 162 ntBASIC3.08□□□□□ -1.92
PCNAP12004 RN7SL601P-201ENST00000471221 293 ntBASIC3.08□□□□□ -1.92
PCNAP12004 TRBV1-201ENST00000476502 284 ntBASIC3.08□□□□□ -1.92
PCNAP12004 RPL32P34-201ENST00000486380 400 ntBASIC3.08□□□□□ -1.92
PCNAP12004 RPL38P4-201ENST00000502376 214 ntBASIC3.08□□□□□ -1.92
PCNAP12004 TBCAP3-201ENST00000512475 312 ntBASIC3.08□□□□□ -1.92
PCNAP12004 RNU6-358P-201ENST00000516564 75 ntBASIC3.08□□□□□ -1.92
PCNAP12004 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.08□□□□□ -1.92
PCNAP12004 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.08□□□□□ -1.92
PCNAP12004 AC078814.3-201ENST00000553036 491 ntBASIC3.08□□□□□ -1.92
PCNAP12004 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.08□□□□□ -1.92
PCNAP12004 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.08□□□□□ -1.92
PCNAP12004 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.08□□□□□ -1.92
PCNAP12004 AC106782.4-201ENST00000568264 210 ntBASIC3.08□□□□□ -1.92
PCNAP12004 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.08□□□□□ -1.92
PCNAP12004 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.08□□□□□ -1.92
PCNAP12004 NRBF2P5-201ENST00000603087 788 ntBASIC3.08□□□□□ -1.92
PCNAP12004 AC019159.1-201ENST00000605094 187 ntBASIC3.08□□□□□ -1.92
PCNAP12004 uc_338.25-201ENST00000613756 156 ntBASIC3.08□□□□□ -1.92
PCNAP12004 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.08□□□□□ -1.92
PCNAP12004 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PCNAP12004 AC100810.6-201ENST00000638068 285 ntBASIC3.08□□□□□ -1.92
PCNAP12004 CASC19-280ENST00000642102 1351 ntBASIC3.08□□□□□ -1.92
PCNAP12004 AC004520.1-201ENST00000608362 1413 ntBASIC3.08□□□□□ -1.92
PCNAP12004 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCNAP12004 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCNAP12004 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.08□□□□□ -1.92
PCNAP12004 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCNAP12004 MTND5P19-201ENST00000424872 1794 ntBASIC3.07□□□□□ -1.92
PCNAP12004 GABRG2-229ENST00000641017 3628 ntBASIC3.07□□□□□ -1.92
PCNAP12004 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCNAP12004 MIR183-201ENST00000384958 110 ntBASIC3.07□□□□□ -1.92
PCNAP12004 BX682237.1-201ENST00000415016 335 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms