Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.77□□□□□ -1.97
VTNP04004 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.77□□□□□ -1.97
VTNP04004 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.77□□□□□ -1.97
VTNP04004 AP001596.2-201ENST00000608410 312 ntBASIC2.77□□□□□ -1.97
VTNP04004 AC107871.2-201ENST00000612894 502 ntBASIC2.77□□□□□ -1.97
VTNP04004 AC025034.2-201ENST00000623264 286 ntBASIC2.77□□□□□ -1.97
VTNP04004 AC093648.1-201ENST00000623546 606 ntBASIC2.77□□□□□ -1.97
VTNP04004 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.77□□□□□ -1.97
VTNP04004 AL157786.1-207ENST00000627771 695 ntBASIC2.77□□□□□ -1.97
VTNP04004 CTSLP2-204ENST00000629029 392 ntBASIC2.77□□□□□ -1.97
VTNP04004 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
VTNP04004 AL049641.1-201ENST00000441055 1948 ntBASIC2.77□□□□□ -1.97
VTNP04004 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VTNP04004 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VTNP04004 ZNF680P1-201ENST00000436625 1469 ntBASIC2.77□□□□□ -1.97
VTNP04004 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
VTNP04004 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VTNP04004 AC091564.4-201ENST00000533934 2194 ntBASIC2.76□□□□□ -1.97
VTNP04004 OR4G2P-201ENST00000328113 903 ntBASIC2.76□□□□□ -1.97
VTNP04004 RNU6-1120P-201ENST00000362988 108 ntBASIC2.76□□□□□ -1.97
VTNP04004 RNU6-1103P-201ENST00000384150 107 ntBASIC2.76□□□□□ -1.97
VTNP04004 RNU6-190P-201ENST00000384154 102 ntBASIC2.76□□□□□ -1.97
VTNP04004 RNU6-517P-201ENST00000384362 110 ntBASIC2.76□□□□□ -1.97
VTNP04004 RNU6-14P-201ENST00000384630 106 ntBASIC2.76□□□□□ -1.97
VTNP04004 RPS4XP7-201ENST00000406274 780 ntBASIC2.76□□□□□ -1.97
VTNP04004 RNA5SP111-201ENST00000411386 101 ntBASIC2.76□□□□□ -1.97
VTNP04004 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.76□□□□□ -1.97
VTNP04004 AC080125.1-201ENST00000414888 684 ntBASIC2.76□□□□□ -1.97
VTNP04004 AL353193.1-201ENST00000421444 268 ntBASIC2.76□□□□□ -1.97
VTNP04004 OOSP1P1-201ENST00000423265 274 ntBASIC2.76□□□□□ -1.97
VTNP04004 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.76□□□□□ -1.97
VTNP04004 AC027673.1-201ENST00000456245 405 ntBASIC2.76□□□□□ -1.97
VTNP04004 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.76□□□□□ -1.97
VTNP04004 RPS29P15-201ENST00000458329 171 ntBASIC2.76□□□□□ -1.97
VTNP04004 RNA5SP76-201ENST00000516277 87 ntBASIC2.76□□□□□ -1.97
VTNP04004 RNU6-677P-201ENST00000516914 101 ntBASIC2.76□□□□□ -1.97
VTNP04004 RNA5SP290-201ENST00000517133 127 ntBASIC2.76□□□□□ -1.97
VTNP04004 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.76□□□□□ -1.97
VTNP04004 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.76□□□□□ -1.97
VTNP04004 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.76□□□□□ -1.97
VTNP04004 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.76□□□□□ -1.97
VTNP04004 RPS3AP4-201ENST00000555161 764 ntBASIC2.76□□□□□ -1.97
VTNP04004 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.76□□□□□ -1.97
VTNP04004 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.76□□□□□ -1.97
VTNP04004 NUTF2P8-201ENST00000604593 363 ntBASIC2.76□□□□□ -1.97
VTNP04004 AL670379.4-201ENST00000605279 254 ntBASIC2.76□□□□□ -1.97
VTNP04004 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.76□□□□□ -1.97
VTNP04004 AC069234.5-201ENST00000611056 416 ntBASIC2.76□□□□□ -1.97
VTNP04004 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VTNP04004 AL365204.3-201ENST00000612448 685 ntBASIC2.76□□□□□ -1.97
VTNP04004 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.76□□□□□ -1.97
VTNP04004 AL590808.1-201ENST00000618696 141 ntBASIC2.76□□□□□ -1.97
VTNP04004 AC068792.1-201ENST00000621354 417 ntBASIC2.76□□□□□ -1.97
VTNP04004 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.76□□□□□ -1.97
VTNP04004 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VTNP04004 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.76□□□□□ -1.97
VTNP04004 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VTNP04004 MAPK10-266ENST00000641066 6555 ntBASIC2.75□□□□□ -1.97
VTNP04004 AC022336.2-201ENST00000568966 2538 ntBASIC2.75□□□□□ -1.97
VTNP04004 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VTNP04004 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.75□□□□□ -1.97
VTNP04004 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VTNP04004 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.75□□□□□ -1.97
VTNP04004 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VTNP04004 RNU6-1167P-201ENST00000363227 94 ntBASIC2.75□□□□□ -1.97
VTNP04004 RNU6-1085P-201ENST00000363576 107 ntBASIC2.75□□□□□ -1.97
VTNP04004 SNORD114-30-201ENST00000364448 72 ntBASIC2.75□□□□□ -1.97
VTNP04004 RNU6-741P-201ENST00000383889 107 ntBASIC2.75□□□□□ -1.97
VTNP04004 RNU6-1027P-201ENST00000383998 107 ntBASIC2.75□□□□□ -1.97
VTNP04004 Y_RNA.554-201ENST00000384672 102 ntBASIC2.75□□□□□ -1.97
VTNP04004 RNU6-780P-201ENST00000391030 104 ntBASIC2.75□□□□□ -1.97
VTNP04004 MIR887-201ENST00000401258 79 ntBASIC2.75□□□□□ -1.97
VTNP04004 RNU6-648P-201ENST00000410190 107 ntBASIC2.75□□□□□ -1.97
VTNP04004 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.75□□□□□ -1.97
VTNP04004 FCF1P9-201ENST00000412546 282 ntBASIC2.75□□□□□ -1.97
VTNP04004 RPS12P24-201ENST00000412619 387 ntBASIC2.75□□□□□ -1.97
VTNP04004 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.75□□□□□ -1.97
VTNP04004 ZNF90P2-204ENST00000419323 1075 ntBASIC2.75□□□□□ -1.97
VTNP04004 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.75□□□□□ -1.97
VTNP04004 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VTNP04004 TRIAP1P1-201ENST00000427062 225 ntBASIC2.75□□□□□ -1.97
VTNP04004 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.75□□□□□ -1.97
VTNP04004 AL591212.2-201ENST00000433923 257 ntBASIC2.75□□□□□ -1.97
VTNP04004 Z82210.1-201ENST00000440037 231 ntBASIC2.75□□□□□ -1.97
VTNP04004 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.75□□□□□ -1.97
VTNP04004 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.75□□□□□ -1.97
VTNP04004 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.75□□□□□ -1.97
VTNP04004 RPL23AP20-201ENST00000447965 421 ntBASIC2.75□□□□□ -1.97
VTNP04004 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VTNP04004 AC092798.1-201ENST00000458542 409 ntBASIC2.75□□□□□ -1.97
VTNP04004 MRPS17P3-201ENST00000465453 385 ntBASIC2.75□□□□□ -1.97
VTNP04004 RPS20P22-201ENST00000473700 357 ntBASIC2.75□□□□□ -1.97
VTNP04004 AL160314.1-201ENST00000490836 438 ntBASIC2.75□□□□□ -1.97
VTNP04004 RBBP4P6-201ENST00000508098 202 ntBASIC2.75□□□□□ -1.97
VTNP04004 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.75□□□□□ -1.97
VTNP04004 RNU6-123P-201ENST00000516163 102 ntBASIC2.75□□□□□ -1.97
VTNP04004 Y_RNA.704-201ENST00000516851 102 ntBASIC2.75□□□□□ -1.97
VTNP04004 AP001893.2-201ENST00000526949 202 ntBASIC2.75□□□□□ -1.97
VTNP04004 ADI1P3-201ENST00000549509 470 ntBASIC2.75□□□□□ -1.97
VTNP04004 TRAV28-201ENST00000557548 323 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms